SMTL ID : 6i89.1

Crystal structure of Antirestriction ArdC protein from R388 plasmid. Metal-free structure.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 4 residues within 4Å: Chain A: F.219, D.221, Y.225, F.227 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.219, A:Y.225, A:F.227, A:F.227 Water bridges: A:D.266, A:D.266 MPD.2: 2 residues within 4Å: Chain A: Y.75, F.122 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.75, A:F.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gonzalez-Montes, L. et al., ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range. Plos Genet. (2020)

Release Date

2020-03-18

Peptides

ArdC protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ArdC protein