SMTL ID : 6iea.1

Structure of RVFV Gn and human monoclonal antibody R13

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: S.243, F.244, D.245 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.243, A:D.245 Water bridges: A:N.7, A:G.10, A:G.10, A:T.30, A:S.243, A:S.243, A:I.246

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 9 residues within 4Å: Chain A: T.20, D.23 Chain B: W.99, S.101, N.102 Chain C: Y.35, Y.52, Y.60, Y.102 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain B Hydrogen bonds: C:Y.35, B:N.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Q. et al., Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus. Nat Microbiol (2019)

Release Date

2019-04-10

Peptides

NSmGnGc: A
R13 L chain: B
R13 H chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
L

C
H

NSmGnGc

R13 L chain

R13 H chain

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