SMTL ID : 6ih3.1

Crystal structure of Phosphite Dehydrogenase from Ralstonia sp. 4506 in complex with non-natural cofactor Nicotinamide Cytosine Dinucleotide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

homo-dimer

Ligands

1 x A7R: [[(2S,3S,4R,5S)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate(Non-covalent)

A7R.1: 21 residues within 4Å: Chain A: K.76, L.100, T.104, G.152, M.153, G.154, A.155, V.156, D.175, P.176, I.177, M.207, V.208, P.209, A.235, C.236, D.261, V.262, H.293, G.295, S.296 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.100, A:T.104 Hydrogen bonds: A:A.155, A:V.156, A:D.175, A:M.207, A:D.261, A:S.296 Water bridges: A:G.154, A:G.157, A:R.158, A:R.158 Salt bridges: A:K.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., Structural Insights into Phosphite Dehydrogenase Variants Favoring a Non-natural Redox Cofactor. Acs Catalysis (2019)

Release Date

2019-03-13

Peptides

Phosphite dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phosphite dehydrogenase

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