SMTL ID : 6j2f.2 (1 other biounit)

Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 in complex with Hendra virus-derived peptide HeV2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ASP- TYR- ILE- ASN- THR- ASN- VAL- LEU- PRO: HeV2(Non-covalent)

ASP-TYR-ILE-ASN-THR-ASN-VAL-LEU-PRO.1: 29 residues within 4Å: Chain A: Y.7, Y.9, A.24, V.34, R.35, F.36, Y.62, R.65, N.66, N.69, A.70, D.72, A.73, T.76, Y.77, G.80, N.83, V.84, Y.87, R.100, Y.102, T.146, K.149, W.150, Y.155, R.158, D.159, Y.162, W.170 34 PLIP interactions: 34 interactions with chain A Hydrophobic interactions: A:Y.7, A:Y.7, A:Y.9, A:A.24, A:N.66, A:N.69, A:A.70, A:V.84, A:Y.102, A:W.150, A:Y.155, A:Y.155, A:Y.155, A:Y.162, A:Y.162 Hydrogen bonds: A:Y.7, A:A.24, A:N.66, A:N.66, A:N.69, A:D.72, A:D.72, A:N.83, A:Y.87, A:R.100, A:Y.102, A:Y.102, A:R.158, A:W.170 Water bridges: A:R.65, A:Y.77, A:Y.77 Salt bridges: A:R.65, A:K.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, D. et al., Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats. Plos Biol. (2019)

Release Date

2019-09-18

Peptides

Ptal-N*01:01: A
beta-2 microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

Ptal-N*01:01

beta-2 microglobulin

Related Entries With Identical Sequence