SMTL ID : 6j9e.1

Cryo-EM structure of Xanthomonos oryzae transcription elongation complex with NusA and the bacteriophage protein P7

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-1-1-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain D: D.460, D.462, D.464 Chain H: A.20 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:D.462

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain D: C.70, C.72, C.85, C.88 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:C.72, D:C.85 ZN.3: 4 residues within 4Å: Chain D: C.815, C.890, C.897, C.900 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:C.815, D:C.890, D:C.900

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

You, L. et al., Structural basis for transcription antitermination at bacterial intrinsic terminator. Nat Commun (2019)

Release Date

2019-07-17

Peptides

DNA-directed RNA polymerase subunit alpha: AB
DNA-directed RNA polymerase subunit beta: C
DNA-directed RNA polymerase subunit beta': D
DNA-directed RNA polymerase subunit omega: E
45L: I
Transcription termination/antitermination protein NusA: J

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

I
J

J
F

DNA-directed RNA polymerase subunit alpha

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase subunit beta'

DNA-directed RNA polymerase subunit omega

45L

Transcription termination/antitermination protein NusA

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