SMTL ID : 6jaf.1

Crystal structure of Trypanosoma brucei gambiense glycerol kinase complex with PPi (pyrophosphatase reaction)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

1 x POP: PYROPHOSPHATE 2-(Non-covalent)

POP.1: 6 residues within 4Å: Chain A: D.14, G.16, T.17, T.18, S.19, R.21 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.14, A:D.14, A:T.17, A:T.18, A:S.19, A:S.19 Salt bridges: A:R.21

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: Q.89, R.90, E.91, W.110, D.260, Q.261, F.285 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.90, A:E.91, A:D.260, A:Q.261 GOL.3: 7 residues within 4Å: Chain B: Q.89, R.90, E.91, W.110, D.260, Q.261, F.285 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.90, B:E.91, B:D.260, B:Q.261

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Balogun, E.O., Glycerol Kinase of African Human Trypanosomes Possesses a Pyrophosphatase Activity. To Be Published

Release Date

2020-01-29

Peptides

Glycerol kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glycerol kinase

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