SMTL ID : 6jjq.1

Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 0.99 A resolution.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 0.99 Å

Oligo State

monomer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 1 residues within 4Å: Chain A: K.110 1 PLIP interactions: 1 interactions with chain A Water bridges: A:K.110

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: R.108, K.110, R.136 Ligand excluded by PLIP CL.3: 5 residues within 4Å: Chain A: N.15, H.25, M.72, N.119, L.153 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain A: H.97, K.110, L.121, R.134, R.136 Ligand excluded by PLIP

2 x NA: SODIUM ION(Non-functional Binders)

NA.5: 8 residues within 4Å: Chain A: Q.22, T.23, R.24, W.30, K.155, A.156, Q.161, M.164 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.156, A:Q.161 Water bridges: A:K.155 NA.6: 3 residues within 4Å: Chain A: Q.182, P.184, Q.185 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Viswanathan, V. et al., Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 0.99 A resolution. To Be Published

Release Date

2019-03-06

Peptides

Peptidyl-tRNA hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-tRNA hydrolase

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