SMTL ID : 6jnf.1

Cryo-EM structure of the translocator of the outer mitochondrial membrane

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-2-2-mer

Ligands

1 x 46E: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl tetradecanoate(Non-covalent)

46E.1: 20 residues within 4Å: Chain A: L.84, A.86, I.106, L.328, R.330, V.332, V.338, L.357 Chain C: T.104, L.107 Chain F: L.84, A.86, L.328, R.330, V.332, L.357 Chain H: T.104, L.107, L.115, Q.122 12 PLIP interactions: 1 interactions with chain C, 5 interactions with chain A, 3 interactions with chain H, 3 interactions with chain F Hydrophobic interactions: C:T.104, A:A.86, A:I.106, A:L.328, A:L.357, H:T.104, H:L.115, F:A.86, F:L.357 Salt bridges: A:R.330, F:R.330 Hydrogen bonds: H:Q.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Araiso, Y. et al., Structure of the mitochondrial import gate reveals distinct preprotein paths. Nature (2019)

Release Date

2019-10-16

Peptides

Mitochondrial import receptor subunit TOM40: AF
Mitochondrial import receptor subunit TOM7: BG
Mitochondrial import receptor subunit TOM22: CH
Mitochondrial import receptor subunit TOM5: DI
Mitochondrial import receptor subunit TOM6: EJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

F
F

B
B

G
G

C
C

H
H

D
D

I
I

E
E

J
J

Mitochondrial import receptor subunit TOM40

Mitochondrial import receptor subunit TOM7

Mitochondrial import receptor subunit TOM22

Mitochondrial import receptor subunit TOM5

Mitochondrial import receptor subunit TOM6

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