SMTL ID : 6jxg.1

Crystasl Structure of Beta-glucosidase D2-BGL from Chaetomella Raphigera

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: Q.67, N.68, L.313, N.317 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Q.67, A:L.313 Hydrogen bonds: A:N.68 Water bridges: A:N.317 NAG.2: 5 residues within 4Å: Chain A: N.266, A.269, A.270, N.273, T.275 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.266 Water bridges: A:N.273, A:N.273 NAG.3: 4 residues within 4Å: Chain A: I.173, D.175, F.204, N.205 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.175

1 x MAN: alpha-D-mannopyranose(Post Translational Modification)

MAN.4: 7 residues within 4Å: Chain A: A.343, L.346, K.347, P.349, E.430, T.431, N.476 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.343, A:K.347, A:E.430, A:E.430

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kao, M.R. et al., Chaetomella raphigerabeta-glucosidase D2-BGL has intriguing structural features and a high substrate affinity that renders it an efficient cellulase supplement for lignocellulosic biomass hydrolysis. Biotechnol Biofuels (2019)

Release Date

2019-11-20

Peptides

Beta-glucosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-glucosidase