SMTL ID : 6ke0.1 (1 other biounit)

Crystal structure of PDE10A in complex with a triazolopyrimidine inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.85, H.119, D.120, D.230 Ligands: MG.2 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.85, A:H.119, A:D.120, A:D.230, A:D.230

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: D.120, E.148, H.151, T.189 Ligands: ZN.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.120

1 x D7C: 2-(5,7-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-2-yl)-1-[(2S)-2-methyl-1,2-dihydroimidazo[1,2-a]benzimidazol-3-yl]ethanone(Non-covalent)

D7C.3: 12 residues within 4Å: Chain A: Y.80, L.231, Y.249, F.252, P.268, M.269, K.274, E.277, V.278, G.281, Q.282, F.285 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.231, A:Y.249, A:F.252, A:P.268, A:M.269, A:E.277, A:V.278, A:F.285, A:F.285, A:F.285 Hydrogen bonds: A:Y.249, A:Q.282 pi-Stacking: A:F.285, A:F.285

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chino, A. et al., Synthesis, SAR study, and biological evaluation of novel 2,3-dihydro-1H-imidazo[1,2-a]benzimidazole derivatives as phosphodiesterase 10A inhibitors. Bioorg.Med.Chem. (2019)

Release Date

2019-08-14

Peptides

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A

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