- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-12-mer
- Ligands
- 24 x MG: MAGNESIUM ION(Non-covalent)
- 12 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
NAI.3: 28 residues within 4Å:- Chain A: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Chain B: H.252, H.253, S.254, T.255
- Ligands: 9TY.4
12 PLIP interactions:11 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:Q.26
- Hydrogen bonds: A:Y.23, A:N.25, A:N.25, A:Q.26, A:Q.26, A:N.45, A:D.48, A:D.80, A:S.107, A:S.107, B:H.252
NAI.7: 28 residues within 4Å:- Chain A: H.252, H.253, S.254, T.255
- Chain B: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Ligands: 9TY.8
12 PLIP interactions:11 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:Q.26
- Hydrogen bonds: B:Y.23, B:N.25, B:N.25, B:Q.26, B:Q.26, B:N.45, B:D.48, B:D.80, B:S.107, B:S.107, A:H.252
NAI.11: 28 residues within 4Å:- Chain C: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Chain D: H.252, H.253, S.254, T.255
- Ligands: 9TY.12
12 PLIP interactions:11 interactions with chain C, 1 interactions with chain D- Hydrophobic interactions: C:Q.26
- Hydrogen bonds: C:Y.23, C:N.25, C:N.25, C:Q.26, C:Q.26, C:N.45, C:D.48, C:D.80, C:S.107, C:S.107, D:H.252
NAI.15: 28 residues within 4Å:- Chain C: H.252, H.253, S.254, T.255
- Chain D: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Ligands: 9TY.16
12 PLIP interactions:11 interactions with chain D, 1 interactions with chain C- Hydrophobic interactions: D:Q.26
- Hydrogen bonds: D:Y.23, D:N.25, D:N.25, D:Q.26, D:Q.26, D:N.45, D:D.48, D:D.80, D:S.107, D:S.107, C:H.252
NAI.19: 28 residues within 4Å:- Chain E: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Chain F: H.252, H.253, S.254, T.255
- Ligands: 9TY.20
12 PLIP interactions:11 interactions with chain E, 1 interactions with chain F- Hydrophobic interactions: E:Q.26
- Hydrogen bonds: E:Y.23, E:N.25, E:N.25, E:Q.26, E:Q.26, E:N.45, E:D.48, E:D.80, E:S.107, E:S.107, F:H.252
NAI.23: 28 residues within 4Å:- Chain E: H.252, H.253, S.254, T.255
- Chain F: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Ligands: 9TY.24
12 PLIP interactions:11 interactions with chain F, 1 interactions with chain E- Hydrophobic interactions: F:Q.26
- Hydrogen bonds: F:Y.23, F:N.25, F:N.25, F:Q.26, F:Q.26, F:N.45, F:D.48, F:D.80, F:S.107, F:S.107, E:H.252
NAI.27: 28 residues within 4Å:- Chain G: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Chain H: H.252, H.253, S.254, T.255
- Ligands: 9TY.28
12 PLIP interactions:11 interactions with chain G, 1 interactions with chain H- Hydrophobic interactions: G:Q.26
- Hydrogen bonds: G:Y.23, G:N.25, G:N.25, G:Q.26, G:Q.26, G:N.45, G:D.48, G:D.80, G:S.107, G:S.107, H:H.252
NAI.31: 28 residues within 4Å:- Chain G: H.252, H.253, S.254, T.255
- Chain H: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Ligands: 9TY.32
12 PLIP interactions:11 interactions with chain H, 1 interactions with chain G- Hydrophobic interactions: H:Q.26
- Hydrogen bonds: H:Y.23, H:N.25, H:N.25, H:Q.26, H:Q.26, H:N.45, H:D.48, H:D.80, H:S.107, H:S.107, G:H.252
NAI.35: 28 residues within 4Å:- Chain I: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Chain J: H.252, H.253, S.254, T.255
- Ligands: 9TY.36
12 PLIP interactions:11 interactions with chain I, 1 interactions with chain J- Hydrophobic interactions: I:Q.26
- Hydrogen bonds: I:Y.23, I:N.25, I:N.25, I:Q.26, I:Q.26, I:N.45, I:D.48, I:D.80, I:S.107, I:S.107, J:H.252
NAI.39: 28 residues within 4Å:- Chain I: H.252, H.253, S.254, T.255
- Chain J: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Ligands: 9TY.40
12 PLIP interactions:11 interactions with chain J, 1 interactions with chain I- Hydrophobic interactions: J:Q.26
- Hydrogen bonds: J:Y.23, J:N.25, J:N.25, J:Q.26, J:Q.26, J:N.45, J:D.48, J:D.80, J:S.107, J:S.107, I:H.252
NAI.43: 28 residues within 4Å:- Chain K: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Chain L: H.252, H.253, S.254, T.255
- Ligands: 9TY.44
12 PLIP interactions:11 interactions with chain K, 1 interactions with chain L- Hydrophobic interactions: K:Q.26
- Hydrogen bonds: K:Y.23, K:N.25, K:N.25, K:Q.26, K:Q.26, K:N.45, K:D.48, K:D.80, K:S.107, K:S.107, L:H.252
NAI.47: 28 residues within 4Å:- Chain K: H.252, H.253, S.254, T.255
- Chain L: G.22, Y.23, G.24, N.25, Q.26, N.45, V.46, D.48, Y.50, I.64, L.77, I.78, P.79, D.80, V.82, M.83, V.86, A.106, S.107, P.129, M.131, V.132, G.133
- Ligands: 9TY.48
12 PLIP interactions:11 interactions with chain L, 1 interactions with chain K- Hydrophobic interactions: L:Q.26
- Hydrogen bonds: L:Y.23, L:N.25, L:N.25, L:Q.26, L:Q.26, L:N.45, L:D.48, L:D.80, L:S.107, L:S.107, K:H.252
- 12 x 9TY: cyclopropane-1,1-dicarboxylic acid(Non-covalent)
9TY.4: 11 residues within 4Å:- Chain A: M.131, V.132, D.191, E.195
- Chain B: E.233, H.253, S.254, S.257
- Ligands: MG.1, MG.2, NAI.3
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:S.254, B:S.254
9TY.8: 11 residues within 4Å:- Chain A: E.233, H.253, S.254, S.257
- Chain B: M.131, V.132, D.191, E.195
- Ligands: MG.5, MG.6, NAI.7
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.254, A:S.254
9TY.12: 11 residues within 4Å:- Chain C: M.131, V.132, D.191, E.195
- Chain D: E.233, H.253, S.254, S.257
- Ligands: MG.9, MG.10, NAI.11
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:S.254, D:S.254
9TY.16: 11 residues within 4Å:- Chain C: E.233, H.253, S.254, S.257
- Chain D: M.131, V.132, D.191, E.195
- Ligands: MG.13, MG.14, NAI.15
4 PLIP interactions:2 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: C:S.254, C:S.254, D:M.131, D:E.195
9TY.20: 11 residues within 4Å:- Chain E: M.131, V.132, D.191, E.195
- Chain F: E.233, H.253, S.254, S.257
- Ligands: MG.17, MG.18, NAI.19
2 PLIP interactions:2 interactions with chain F- Hydrogen bonds: F:S.254, F:S.254
9TY.24: 11 residues within 4Å:- Chain E: E.233, H.253, S.254, S.257
- Chain F: M.131, V.132, D.191, E.195
- Ligands: MG.21, MG.22, NAI.23
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:S.254, E:S.254
9TY.28: 11 residues within 4Å:- Chain G: M.131, V.132, D.191, E.195
- Chain H: E.233, H.253, S.254, S.257
- Ligands: MG.25, MG.26, NAI.27
2 PLIP interactions:2 interactions with chain H- Hydrogen bonds: H:S.254, H:S.254
9TY.32: 11 residues within 4Å:- Chain G: E.233, H.253, S.254, S.257
- Chain H: M.131, V.132, D.191, E.195
- Ligands: MG.29, MG.30, NAI.31
5 PLIP interactions:3 interactions with chain H, 2 interactions with chain G- Hydrogen bonds: H:M.131, H:D.191, H:E.195, G:S.254, G:S.254
9TY.36: 11 residues within 4Å:- Chain I: M.131, V.132, D.191, E.195
- Chain J: E.233, H.253, S.254, S.257
- Ligands: MG.33, MG.34, NAI.35
2 PLIP interactions:2 interactions with chain J- Hydrogen bonds: J:S.254, J:S.254
9TY.40: 11 residues within 4Å:- Chain I: E.233, H.253, S.254, S.257
- Chain J: M.131, V.132, D.191, E.195
- Ligands: MG.37, MG.38, NAI.39
1 PLIP interactions:1 interactions with chain I- Hydrogen bonds: I:S.254
9TY.44: 11 residues within 4Å:- Chain K: M.131, V.132, D.191, E.195
- Chain L: E.233, H.253, S.254, S.257
- Ligands: MG.41, MG.42, NAI.43
1 PLIP interactions:1 interactions with chain L- Hydrogen bonds: L:S.254
9TY.48: 11 residues within 4Å:- Chain K: E.233, H.253, S.254, S.257
- Chain L: M.131, V.132, D.191, E.195
- Ligands: MG.45, MG.46, NAI.47
1 PLIP interactions:1 interactions with chain K- Hydrogen bonds: K:S.254
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chen, C.Y. et al., Temperature-Resolved Cryo-EM Uncovers Structural Bases of Temperature-Dependent Enzyme Functions. J.Am.Chem.Soc. (2019)
- Release Date
- 2020-03-25
- Peptides
- Ketol-acid reductoisomerase: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
L
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-12-mer
- Ligands
- 24 x MG: MAGNESIUM ION(Non-covalent)
- 12 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
- 12 x 9TY: cyclopropane-1,1-dicarboxylic acid(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chen, C.Y. et al., Temperature-Resolved Cryo-EM Uncovers Structural Bases of Temperature-Dependent Enzyme Functions. J.Am.Chem.Soc. (2019)
- Release Date
- 2020-03-25
- Peptides
- Ketol-acid reductoisomerase: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
L