SMTL ID : 6kxk.8 (7 other biounits)

BON1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: W.377, N.393, S.398, S.399, Y.400, S.401 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.393, A:S.399 GOL.6: 5 residues within 4Å: Chain A: P.336, R.337, Y.344, I.345, F.418 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.345, A:I.345

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: F.28, S.29, Y.89, F.91, P.542 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.91 EDO.3: 8 residues within 4Å: Chain A: Y.89, H.90, T.93, V.94, Q.95, A.130, L.131, S.132 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.95, A:Q.95, A:L.131, A:S.132 Water bridges: A:T.93 EDO.4: 5 residues within 4Å: Chain A: Q.57, K.58, V.94, Q.95, T.96 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.96 Water bridges: A:Q.57, A:V.94, A:T.96 EDO.5: 2 residues within 4Å: Chain A: D.371, K.372 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.372 EDO.7: 6 residues within 4Å: Chain A: F.108, M.115, L.116, K.117, E.120, Q.121 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.117, A:Q.121 EDO.8: 3 residues within 4Å: Chain A: Q.366, F.367, K.372 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.372, A:K.372

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Q.C. et al., Crystal Structure of an Arabidopsis Copine providing insights into this protein family. To be published

Release Date

2020-09-16

Peptides

Protein BONZAI 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

Protein BONZAI 1

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