SMTL ID : 6ll9.1

Crystal structure of D-alanine-D-alanine ligase from Aeromonas hydrophila

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

2 x DAL: D-ALANINE(Non-covalent)

DAL.1: 4 residues within 4Å: Chain A: R.323, G.344, S.349, M.350 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.344, A:S.349 Salt bridges: A:R.323 DAL.2: 4 residues within 4Å: Chain B: G.344, T.346, S.349, M.350 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.344

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Insights into the Inhibition ofAeromonas hydrophilad-Alanine-d-Alanine Ligase by Integration of Kinetics and Structural Analysis. J.Agric.Food Chem. (2020)

Release Date

2020-07-15

Peptides

D-alanine--D-alanine ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D-alanine--D-alanine ligase