SMTL ID : 6lvs.4 (5 other biounits)

USP14 catalytic domain mutant C114S

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.73 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: N.42, A.43, Q.46, Y.352, V.353, S.354, F.366, D.367, D.368 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.352, A:S.354, A:S.354, A:D.368 GOL.2: 5 residues within 4Å: Chain A: I.130, N.187, Q.188, L.189, Q.190 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.189

5 x NA: SODIUM ION(Non-functional Binders)

NA.3: 5 residues within 4Å: Chain A: F.163, L.189, Y.239, L.240, T.241 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.239, A:T.241, A:T.241 NA.4: 5 residues within 4Å: Chain A: M.244, R.246, V.263, F.265, S.383 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.246, A:V.263 NA.5: 6 residues within 4Å: Chain A: T.33, L.35, T.38, M.41, N.42, P.97 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.35, A:T.38, A:T.38, A:N.42 NA.6: 5 residues within 4Å: Chain A: P.96, P.97, I.98, I.99 Ligands: FMT.9 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.98, A:I.99 NA.7: 6 residues within 4Å: Chain A: R.381, L.382, S.383, G.384, W.388, H.389 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.382, A:G.384

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.8: 7 residues within 4Å: Chain A: N.34, N.37, T.38, S.39, Q.122, G.350, H.351 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.34, A:S.39, A:S.39, A:Q.122 FMT.9: 2 residues within 4Å: Chain A: I.99 Ligands: NA.6 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, H.C., USP14 catalytic domain mutant C114S. To Be Published

Release Date

2020-03-18

Peptides

Ubiquitin carboxyl-terminal hydrolase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Ubiquitin carboxyl-terminal hydrolase 14

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