SMTL ID : 6mgg.2 (1 other biounit)

Succinyl-CoA synthase from Francisella tularensis, phosphorylated, in complex with CoA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

hetero-1-1-mer

Ligands

1 x COA: COENZYME A(Non-covalent)

COA.1: 23 residues within 4Å: Chain A: G.15, T.17, G.18, K.19, N.20, V.39, T.40, P.41, K.43, Y.72, V.73, P.74, F.77, S.81, I.96, T.97, E.98, N.123, C.124, P.125, I.137, G.155, H.247 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:N.20, A:T.97 Hydrogen bonds: A:G.15, A:T.17, A:T.17, A:K.19, A:N.20, A:N.20, A:D.80, A:D.80, A:I.96, A:E.98, A:E.98 Water bridges: A:G.21, A:E.84 Salt bridges: A:K.43

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 1 residues within 4Å: Chain A: H.247 6 PLIP interactions: 5 Ligand-Water interactions, 1 interactions with chain A Metal complexes: H2O.2, H2O.2, H2O.5, H2O.6, H2O.14, A:H.247

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 5 residues within 4Å: Chain B: K.147, V.148, E.163, V.164, K.167 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.147, B:E.163, B:E.163 Water bridges: B:K.147, B:K.167 EDO.4: 5 residues within 4Å: Chain B: N.259, I.260, G.282, K.283, L.386 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.259, B:K.283

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osipiuk, J. et al., Succinyl-CoA synthase from Francisella tularensis. to be published

Release Date

2018-09-26

Peptides

Succinate--CoA ligase [ADP-forming] subunit alpha: A
Succinate--CoA ligase [ADP-forming] subunit beta: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Succinate--CoA ligase [ADP-forming] subunit alpha

Succinate--CoA ligase [ADP-forming] subunit beta

Related Entries With Identical Sequence