SMTL ID : 6mly.3 (3 other biounits)

Bifunctional GH43-CE Bacteroides eggerthii, BACEGG_01304

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 5 residues within 4Å: Chain A: G.554, S.555, A.556, S.628, H.768 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.556 Hydrogen bonds: A:A.556, A:S.628, A:S.629 Salt bridges: A:H.768

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: D.32, M.49, W.96, R.275 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.32, A:R.275, A:R.275 Water bridges: A:E.200, A:E.200 EDO.3: 5 residues within 4Å: Chain A: L.197, R.224, F.267, D.269, R.275 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.224, A:D.269, A:R.275

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain A: T.639, Y.720, D.722, D.725 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.720, A:D.722

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pereira, G.V. et al., Degradation of complex arabinoxylans by human colonic Bacteroidetes. Nat Commun (2021)

Release Date

2019-10-02

Peptides

Bifunctional GH43-CE protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Bifunctional GH43-CE protein

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