SMTL ID : 6mr7.1

DNA polymerase beta substrate complex with templating adenine and incoming Fapy-dGTP analog

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.14 Å
Oligo State
monomer
Ligands
1 x DG- DT- DC- DG- DG: DNA (5'-D(P*GP*TP*CP*GP*G)-3')(Non-covalent)
1 x GKS: 1-[2-amino-5-(formylamino)-6-oxo-1,6-dihydropyrimidin-4-yl]-2,5-anhydro-1,3-dideoxy-6-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-D-ribo-hexitol(Non-covalent)
2 x CA: CALCIUM ION(Non-covalent)
4 x NA: SODIUM ION(Non-functional Binders)
4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Smith, M.R. et al., A guardian residue hinders insertion of a Fapy•dGTP analog by modulating the open-closed DNA polymerase transition. Nucleic Acids Res. (2019)
Release Date
2019-01-30
Peptides
DNA polymerase beta: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

DNA polymerase beta

Related Entries With Identical Sequence

1bpx.1 | 1bpy.1 | 1bpz.1 | 1mq2.1 | 1mq3.1 | 1tv9.1 | 1tva.1 | 1zjm.1 | 1zjn.1 | 1zqa.1 | 1zqb.1 | 1zqc.1 | 1zqd.1 | 1zqe.1 | 1zqf.1 | 1zqg.1 | 1zqh.1 | 1zqi.1 | 1zqj.1 | 1zqk.1 | 1zql.1 | 1zqm.1 | 1zqn.1 | 1zqo.1 | 1zqp.1 | 1zqq.1 | 1zqr.1 | 1zqs.1 | 1zqt.1 | 2fmp.1  more...