SMTL ID : 6n2s.1

Ternary complex crystal structure of DNA polymerase Beta with 5-carboxy-dC (5-caC) at the templating position

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.46 Å
Oligo State
monomer
Ligands
1 x DG- DT- DC- DG- DG: DNA (5'-D(P*GP*TP*CP*GP*G)-3')(Non-covalent)
2 x MG: MAGNESIUM ION(Non-covalent)
2 x NA: SODIUM ION(Non-functional Binders)
1 x 1GC: 2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Howard, M.J. et al., Molecular basis for the faithful replication of 5-methylcytosine and its oxidized forms by DNA polymerase beta. J.Biol.Chem. (2019)
Release Date
2019-03-27
Peptides
DNA polymerase beta: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

DNA polymerase beta

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1bpx.1 | 1bpy.1 | 1bpz.1 | 1mq2.1 | 1mq3.1 | 1tv9.1 | 1tva.1 | 1zjm.1 | 1zjn.1 | 1zqa.1 | 1zqb.1 | 1zqc.1 | 1zqd.1 | 1zqe.1 | 1zqf.1 | 1zqg.1 | 1zqh.1 | 1zqi.1 | 1zqj.1 | 1zqk.1 | 1zql.1 | 1zqm.1 | 1zqn.1 | 1zqo.1 | 1zqp.1 | 1zqq.1 | 1zqr.1 | 1zqs.1 | 1zqt.1 | 2fmp.1  more...