SMTL ID : 6n9l.1 (1 other biounit)

Crystal structure of T. maritima UvrA d117-399 with ADP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.440, C.443, C.463, C.466 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.440, A:C.443, A:C.463, A:C.466, H2O.7

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 15 residues within 4Å: Chain A: H.18, N.19, V.38, S.39, G.40, S.41, G.42, K.43, S.44, S.45, G.267, Y.520, V.521, Q.525, T.529 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:G.40, A:S.41, A:G.42, A:K.43, A:S.44, A:S.45, A:Q.525, A:T.529 Water bridges: A:H.18, A:H.18, A:H.18, A:S.39, A:K.43, A:S.44, A:K.522 Salt bridges: A:K.43 pi-Stacking: A:H.18, A:H.18 ADP.3: 14 residues within 4Å: Chain A: Y.179, R.184, T.188, N.322, N.323, V.342, S.343, G.344, S.345, G.346, K.347, S.348, S.349, G.609 23 PLIP interactions: 23 interactions with chain A Hydrogen bonds: A:R.184, A:R.184, A:G.344, A:S.345, A:G.346, A:K.347, A:S.348, A:S.348, A:S.349, A:S.349, A:G.609 Water bridges: A:N.322, A:N.322, A:N.322, A:N.322, A:N.322, A:K.347, A:K.347, A:S.348, A:K.610 Salt bridges: A:K.347 pi-Cation interactions: A:R.184, A:R.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Case, B.C. et al., The ATPase mechanism of UvrA2 reveals the distinct roles of proximal and distal ATPase sites in nucleotide excision repair. Nucleic Acids Res. (2019)

Release Date

2019-05-01

Peptides

UvrABC system protein A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UvrABC system protein A

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