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SMTL ID : 6n9l.1
(1 other biounit)
Crystal structure of T. maritima UvrA d117-399 with ADP
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.01 Å
Oligo State
monomer
Ligands
1 x
ZN
:
ZINC ION
(Non-covalent)
ZN.1:
4 residues within 4Å:
Chain A:
C.440
,
C.443
,
C.463
,
C.466
5
PLIP interactions
:
4 interactions with chain A
,
1 Ligand-Water interactions
Metal complexes:
A:C.440
,
A:C.443
,
A:C.463
,
A:C.466
,
H
2
O.7
2 x
ADP
:
ADENOSINE-5'-DIPHOSPHATE
(Non-covalent)
ADP.2:
15 residues within 4Å:
Chain A:
H.18
,
N.19
,
V.38
,
S.39
,
G.40
,
S.41
,
G.42
,
K.43
,
S.44
,
S.45
,
G.267
,
Y.520
,
V.521
,
Q.525
,
T.529
18
PLIP interactions
:
18 interactions with chain A
Hydrogen bonds:
A:G.40
,
A:S.41
,
A:G.42
,
A:K.43
,
A:S.44
,
A:S.45
,
A:Q.525
,
A:T.529
Water bridges:
A:H.18
,
A:H.18
,
A:H.18
,
A:S.39
,
A:K.43
,
A:S.44
,
A:K.522
Salt bridges:
A:K.43
pi-Stacking:
A:H.18
,
A:H.18
ADP.3:
14 residues within 4Å:
Chain A:
Y.179
,
R.184
,
T.188
,
N.322
,
N.323
,
V.342
,
S.343
,
G.344
,
S.345
,
G.346
,
K.347
,
S.348
,
S.349
,
G.609
23
PLIP interactions
:
23 interactions with chain A
Hydrogen bonds:
A:R.184
,
A:R.184
,
A:G.344
,
A:S.345
,
A:G.346
,
A:K.347
,
A:S.348
,
A:S.348
,
A:S.349
,
A:S.349
,
A:G.609
Water bridges:
A:N.322
,
A:N.322
,
A:N.322
,
A:N.322
,
A:N.322
,
A:K.347
,
A:K.347
,
A:S.348
,
A:K.610
Salt bridges:
A:K.347
pi-Cation interactions:
A:R.184
,
A:R.184
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Case, B.C. et al., The ATPase mechanism of UvrA2 reveals the distinct roles of proximal and distal ATPase sites in nucleotide excision repair. Nucleic Acids Res. (2019)
Release Date
2019-05-01
Peptides
UvrABC system protein A:
A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
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UvrABC system protein A
Related Entries With Identical Sequence
6n9l.2
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
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