SMTL ID : 6nbo.1

Crystal structure of N-isopropylammelide isopropylaminohydrolase from Burkholderia multivorans ATCC 17616

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.65, H.67, H.218, H.250, D.304 Ligands: ZN.12 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.65, A:H.67, A:H.218, A:D.304, H2O.10 ZN.12: 5 residues within 4Å: Chain A: H.218, H.220, H.250, D.304 Ligands: ZN.1 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.250, A:D.304, H2O.10

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: F.331, R.332, R.333, A.336 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: G.20, A.21, T.374, L.375 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: H.346, G.358, L.359, Q.360 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain A: A.118, V.384, R.385, G.399 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain A: P.383, V.384 Ligand excluded by PLIP CL.7: 2 residues within 4Å: Chain A: G.134, L.135 Ligand excluded by PLIP

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.8: 3 residues within 4Å: Chain A: W.73, G.74, R.307 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.74, A:R.307 Water bridges: A:M.75 EDO.9: 7 residues within 4Å: Chain A: L.148, R.149, G.150, Q.151, V.152, E.153, S.391 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.150, A:S.391, A:S.391 Water bridges: A:L.148, A:V.152, A:V.152, A:R.364 EDO.10: 5 residues within 4Å: Chain A: L.184, G.212, R.213, G.214, K.245 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.214 Water bridges: A:D.183 EDO.11: 4 residues within 4Å: Chain A: D.32, R.33, A.356, R.364 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.364 Water bridges: A:D.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Conrady, D.G. et al., Crystal structure of N-isopropylammelide isopropylaminohydrolase from Burkholderia multivorans ATCC 17616. to be published

Release Date

2018-12-26

Peptides

N-isopropylammelide isopropylaminohydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

N-isopropylammelide isopropylaminohydrolase