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SMTL ID : 6odz.1

Benzensulfonamides bearing spyrohydantoin moieties act as potent inhibitors of human carbonic anhydrases II and VII and show neuropathic pain attenuating effects

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: M8J.2

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

2 x M8J: 2-(2,4-dioxo-1,3-diazaspiro[4.4]nonan-3-yl)-N-(4-sulfamoylphenyl)acetamide(Non-covalent)

M8J.2:	13 residues within 4Å: Chain A: Q.92, H.94, H.96, H.119, V.121, F.130, V.142, L.197, T.198, T.199, W.208 Ligands: ZN.1, GOL.4 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.121, A:F.130, A:L.197 Hydrogen bonds: A:Q.92, A:T.198, A:T.198 Water bridges: A:T.199
M8J.3:	9 residues within 4Å: Chain A: H.4, W.5, H.10, N.11, H.15, W.16, K.18, D.19, F.20 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:H.4, A:N.11 Hydrogen bonds: A:N.11, A:D.19, A:D.19, A:D.19 Water bridges: A:W.5

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4:

8 residues within 4Å:

Chain A: N.62, H.64, A.65, N.67, Q.92, H.94, T.199
Ligands: M8J.2

5 PLIP interactions:

5 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:N.67, A:Q.92
Water bridges: A:T.199

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Angeli, A. et al., Benzensulfonamides bearing spyrohydantoin moieties act as potent inhibitors of human carbonic anhydrases II and VII and show neuropathic pain attenuating effects. Eur.J.Med.Chem. (2019)

Release Date

2019-06-12

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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