SMTL ID : 6oei.1

Yeast Spc42 N-terminal coiled-coil fused to PDB: 3K2N

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.58 Å

Oligo State

homo-dimer

Ligands

4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 9 residues within 4Å: Chain A: I.139, R.140, P.142, L.145, N.287, A.288, Y.291 Chain B: G.249, R.251 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:P.142, A:L.145, A:A.288, A:Y.291 Hydrogen bonds: A:N.287, B:R.251 MPD.2: 7 residues within 4Å: Chain A: M.129, S.272, L.273, G.276 Chain B: L.126, K.127, Q.130 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:K.127, B:Q.130, B:Q.130 Hydrogen bonds: A:L.273 MPD.3: 9 residues within 4Å: Chain A: G.249, R.251 Chain B: I.139, R.140, P.142, L.145, N.287, A.288, Y.291 6 PLIP interactions: 5 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:P.142, B:L.145, B:A.288, B:Y.291 Hydrogen bonds: B:N.287, A:R.251 MPD.4: 7 residues within 4Å: Chain A: L.126, K.127, Q.130 Chain B: M.129, S.272, L.273, G.276 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:K.127, A:Q.130, A:Q.130 Hydrogen bonds: B:L.273

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Drennan, A.C. et al., Structure and function of Spc42 coiled-coils in yeast centrosome assembly and duplication. Mol.Biol.Cell (2019)

Release Date

2019-04-24

Peptides

Spindle pole body component SPC42,Sigma-54-dependent transcriptional regulator: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Spindle pole body component SPC42,Sigma-54-dependent transcriptional regulator