SMTL ID : 6ogb.2 (1 other biounit)

Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-I1Y), H148D; circular permutant (50-51)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 4 residues within 4Å: Chain A: K.65, T.66, R.67, E.82 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.82 Water bridges: A:T.66 ACT.2: 5 residues within 4Å: Chain A: E.53, R.54, T.55, Y.140, Q.142 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Q.142 Hydrogen bonds: A:E.53, A:T.55 Water bridges: A:T.66 ACT.3: 1 residues within 4Å: Chain A: H.35 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:H.35 Water bridges: A:H.35 Salt bridges: A:H.35 ACT.4: 2 residues within 4Å: Chain A: E.100, G.132 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 3 residues within 4Å: Chain A: R.67, R.80, E.82 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.67, A:R.67 Water bridges: A:R.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, C.Y. et al., Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems. J.Phys.Chem.B (2020)

Release Date

2020-04-08

Peptides

Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-I1Y), H148D; circular permutant (50-51): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-I1Y), H148D; circular permutant (50-51)

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