SMTL ID : 6onb.1 (1 other biounit)

Crystal Structure of the ZIG-8-RIG-5 IG1-IG1 heterodimer, monoclinic form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 3 residues within 4Å: Chain B: G.89, N.90, E.106 No protein-ligand interaction detected (PLIP)

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.69 Chain B: H.36, T.97, E.98 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:E.98 Salt bridges: B:H.36, A:R.69 Water bridges: A:R.69 SO4.3: 5 residues within 4Å: Chain B: R.59, R.60, N.61, K.62 Ligands: SO4.4 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.61, B:N.61, B:K.62 Salt bridges: B:R.59 SO4.4: 3 residues within 4Å: Chain B: R.59, R.60 Ligands: SO4.3 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.59 Salt bridges: B:R.60 SO4.5: 4 residues within 4Å: Chain B: R.59, K.62, N.82, Q.84 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.82 Water bridges: B:S.86 Salt bridges: B:R.59, B:K.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, S. et al., Family of neural wiring receptors in bilaterians defined by phylogenetic, biochemical, and structural evidence. Proc.Natl.Acad.Sci.USA (2019)

Release Date

2019-05-15

Peptides

Zwei Ig domain protein zig-8: A
NeuRonal IgCAM-5: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Zwei Ig domain protein zig-8

NeuRonal IgCAM-5

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