SMTL ID : 6oss.1

Crystal Structure of the Acyl-Carrier-Protein UDP-N-Acetylglucosamine O-Acyltransferase LpxA from Proteus mirabilis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

homo-trimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: G.36, H.38, N.54, G.55, R.103 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.38, A:N.54, A:G.55 Water bridges: A:R.103, A:R.103 Salt bridges: A:R.103 SO4.3: 5 residues within 4Å: Chain A: G.175, G.176, Q.191 Chain C: H.163, H.194 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:G.176, A:Q.191 Salt bridges: C:H.163, C:H.194 SO4.4: 5 residues within 4Å: Chain A: H.163, H.194 Chain B: G.175, G.176, Q.191 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Salt bridges: A:H.163, A:H.194 Hydrogen bonds: B:G.176, B:Q.191 SO4.5: 3 residues within 4Å: Chain B: H.38, N.54, G.55 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.55, B:R.103 SO4.6: 4 residues within 4Å: Chain B: H.163, H.194 Chain C: G.175, G.176 3 PLIP interactions: 1 interactions with chain C, 2 interactions with chain B Hydrogen bonds: C:G.176 Salt bridges: B:H.163, B:H.194 SO4.7: 4 residues within 4Å: Chain C: G.36, N.54, G.55, R.103 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:G.55, C:R.103 Water bridges: C:S.37

1 x PO3: PHOSPHITE ION(Non-covalent)

PO3.2: 6 residues within 4Å: Chain A: M.159, C.177 Chain B: M.159, C.177 Chain C: M.159, C.177 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Crystal Structure of the Acyl-Carrier-Protein UDP-N-Acetylglucosamine O-Acyltransferase LpxA from Proteus mirabilis. To Be Published

Release Date

2020-01-29

Peptides

Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase