SMTL ID : 6otu.1

Crystal structure of a glucose-6-phosphate isomerase from Chlamydia trachomatis D/UW-3/Cx

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

6 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 4 residues within 4Å: Chain A: T.55, A.461, Q.462 Chain B: L.532 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.462 ACT.2: 2 residues within 4Å: Chain A: G.213, M.250 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.255 ACT.3: 3 residues within 4Å: Chain A: L.417, S.418 Chain B: L.216 No protein-ligand interaction detected (PLIP) ACT.5: 4 residues within 4Å: Chain A: L.532 Chain B: T.55, A.461, Q.462 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:T.55, B:Q.462 ACT.6: 2 residues within 4Å: Chain B: G.213, M.250 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.255 ACT.7: 3 residues within 4Å: Chain A: L.216 Chain B: L.417, S.418 No protein-ligand interaction detected (PLIP)

2 x G6Q: GLUCOSE-6-PHOSPHATE(Non-covalent)

G6Q.4: 15 residues within 4Å: Chain A: I.157, G.158, G.159, S.160, S.210, K.211, S.212, T.215, G.268, R.269, Q.351, E.355, Q.494, K.501 Chain B: H.386 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:G.159, A:S.160, A:S.160, A:K.211, A:S.212, A:T.215, A:G.268, A:R.269, A:R.269, A:Q.351, A:E.355, A:Q.494, A:K.501 Water bridges: A:I.157, A:S.160, A:Q.494 Salt bridges: A:K.501 G6Q.8: 15 residues within 4Å: Chain A: H.386 Chain B: I.157, G.158, G.159, S.160, S.210, K.211, S.212, T.215, G.268, R.269, Q.351, E.355, Q.494, K.501 17 PLIP interactions: 16 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:G.159, B:S.160, B:S.160, B:K.211, B:S.212, B:G.268, B:R.269, B:R.269, B:Q.351, B:E.355, B:Q.494, B:K.501, A:H.386 Water bridges: B:I.157, B:S.160, B:Q.494 Salt bridges: B:K.501

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Edwards, T.E. et al., Crystal structure of a glucose-6-phosphate isomerase from Chlamydia trachomatis D/UW-3/Cx. To Be Published

Release Date

2019-05-15

Peptides

Glucose-6-phosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glucose-6-phosphate isomerase