SMTL ID : 6ovo.1

Crystal structure of the unliganded PG10 TCR

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

hetero-1-1-mer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: H.7, P.8, S.9 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.9 Salt bridges: A:H.7 SO4.5: 2 residues within 4Å: Chain B: P.61, S.62 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.62, B:S.62 Water bridges: B:S.62, B:R.63 SO4.6: 2 residues within 4Å: Chain B: K.19, S.20 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.20

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 1 residues within 4Å: Chain A: R.61 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.61 Water bridges: A:R.61

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain B: H.169, S.170 Ligand excluded by PLIP CL.4: 1 residues within 4Å: Chain B: K.18 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reinink, P. et al., A TCR beta-Chain Motif Biases toward Recognition of Human CD1 Proteins. J Immunol. (2019)

Release Date

2019-11-20

Peptides

Alpha Chain T-Cell Receptor PG10: A
Beta Chain T-Cell Receptor PG10: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Alpha Chain T-Cell Receptor PG10

Beta Chain T-Cell Receptor PG10