SMTL ID : 6oyc.2 (3 other biounits)

Glycosylation Associate Protein (Gap123) complex from Streptococcus agalactiae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: K.3, T.7, E.27, R.58 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.3, A:E.27 Water bridges: A:I.4, A:T.7 GOL.2: 3 residues within 4Å: Chain A: R.305, S.306, A.307 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.306, A:A.307 GOL.3: 7 residues within 4Å: Chain A: Q.108, R.109, Y.110, L.118, Q.121, G.265, L.266 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.108, A:Q.121 GOL.4: 4 residues within 4Å: Chain A: Y.131, P.179, R.259, N.261 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.259, A:R.259, A:N.261

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 3 residues within 4Å: Chain A: K.217, W.219, E.233 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.219 Salt bridges: A:K.217

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

zhang, H. et al., Glycosylation Associate Protein (Gap123) complex from Streptococcus agalactiae. To Be Published

Release Date

2020-05-20

Peptides

Glycosylation Associate Protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Glycosylation Associate Protein 2

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