SMTL ID : 6p0x.2 (1 other biounit)

Structure of the N-terminal domain of effector protein SpvB from Salmonella typhimurium strain LT2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

BTB.1: 7 residues within 4Å: Chain A: A.219, Q.236, L.238, F.295, P.296, D.297, E.298 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.297, A:D.297, A:E.298 Salt bridges: A:D.297, A:E.298

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: L.187, N.190, D.192, E.247, A.260, S.263, W.264 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.190, A:D.192, A:E.247, A:W.264 GOL.3: 5 residues within 4Å: Chain A: Q.168, M.208, L.273, Y.276, I.280 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.168 GOL.4: 6 residues within 4Å: Chain A: C.51, A.52, T.53, L.170, M.208, R.209 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.53, A:T.53 Water bridges: A:C.51, A:L.211 GOL.5: 1 residues within 4Å: Chain A: E.312 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.312

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, C. et al., Structure of the N-terminal domain of effector protein SpvB from Salmonella typhimurium strain LT2. To Be Published

Release Date

2019-06-19

Peptides

Salmonella plasmid virulence: SpvB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Salmonella plasmid virulence: SpvB

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