SMTL ID : 6p61.3 (3 other biounits)

Structure of a Glycosyltransferase from Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: A.127, C.128, I.150, C.152, G.153, I.154, Y.197 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:C.128 Water bridges: A:C.152 EDO.2: 5 residues within 4Å: Chain A: L.36, K.42, Y.45, I.47, E.68 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.42 Water bridges: A:K.42, A:E.68 EDO.4: 5 residues within 4Å: Chain A: F.22, D.52, N.77, G.79, L.80 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.52, A:S.83 EDO.5: 4 residues within 4Å: Chain A: N.39, F.40, P.41, S.111 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.39, A:S.111 Water bridges: A:S.111

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.3: 5 residues within 4Å: Chain A: R.30, Y.104, N.106, S.107, R.198 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.30, A:N.106, A:S.107 Water bridges: A:Y.104, A:E.137 Salt bridges: A:R.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abendroth, J. et al., Structure of a Glycosyltransferase from Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197). to be published

Release Date

2019-07-10

Peptides

Glycosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Glycosyltransferase

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