SMTL ID : 6p72.1 (1 other biounit)

Crystal Structure of the Cedar henipavirus Attachment G Glycoprotein global domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.28 Å

Oligo State

monomer

Ligands

5 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 9 residues within 4Å: Chain A: C.117, N.118, F.122, G.185, E.186, F.188, Q.246, N.247, M.249 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.186, A:N.247 NAG-NAG.2: 4 residues within 4Å: Chain A: I.127, N.129, S.141, E.143 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 5 residues within 4Å: Chain A: D.135, N.136, I.172, N.232, R.235 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 4 residues within 4Å: Chain A: E.298, N.306, W.307, N.309 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.298 NAG-NAG.5: 5 residues within 4Å: Chain A: V.22, N.369, T.371, T.372, L.374 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.22

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.6: 1 residues within 4Å: Chain A: N.164 No protein-ligand interaction detected (PLIP) NAG.7: 1 residues within 4Å: Chain A: N.210 No protein-ligand interaction detected (PLIP) NAG.8: 1 residues within 4Å: Chain A: N.248 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Laing, E.D. et al., Structural and functional analyses reveal promiscuous and species specific use of ephrin receptors by Cedar virus. Proc.Natl.Acad.Sci.USA (2019)

Release Date

2019-09-25

Peptides

Attachment glycoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Attachment glycoprotein

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