- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ASN: ASPARAGINE(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 8 residues within 4Å:- Chain A: Q.288, D.294, A.295, G.298, F.299, P.324, Q.325, Q.328
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.288
- Water bridges: A:G.298
GOL.7: 8 residues within 4Å:- Chain C: Q.288, D.294, A.295, G.298, F.299, P.324, Q.325, Q.328
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:Q.288
- Water bridges: C:G.298
- 2 x IMD: IMIDAZOLE(Non-covalent)
- 2 x FLC: CITRATE ANION(Non-covalent)
FLC.5: 5 residues within 4Å:- Chain A: S.232, D.233, L.234
- Chain B: K.221, Y.244
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:K.221, A:D.233
- Water bridges: B:Y.244, B:Y.244, A:D.233
- Salt bridges: B:K.221, B:K.221
FLC.10: 5 residues within 4Å:- Chain C: S.232, D.233, L.234
- Chain D: K.221, Y.244
6 PLIP interactions:4 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:K.221, D:Y.244, C:D.233
- Salt bridges: D:K.221, D:K.221
- Water bridges: C:D.233
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lubkowski, J. et al., Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase. Protein Sci. (2019)
- Release Date
- 2019-09-04
- Peptides
- L-asparaginase 2: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
DC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ASN: ASPARAGINE(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 2 x IMD: IMIDAZOLE(Non-covalent)
- 2 x FLC: CITRATE ANION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lubkowski, J. et al., Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase. Protein Sci. (2019)
- Release Date
- 2019-09-04
- Peptides
- L-asparaginase 2: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
DC
CD
D