SMTL ID : 6ppu.1

Cryo-EM structure of AdnAB-AMPPNP-DNA complex

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain B: H.512, D.599, D.613, L.614 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.512, B:L.614

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.2: 10 residues within 4Å: Chain B: C.486, R.489, A.700, R.701, N.703, C.706, C.709, V.711, C.715, Q.718 1 PLIP interactions: 1 interactions with chain B, Metal complexes: B:R.701

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jia, N. et al., Structures and single-molecule analysis of bacterial motor nuclease AdnAB illuminate the mechanism of DNA double-strand break resection. Proc.Natl.Acad.Sci.USA (2019)

Release Date

2019-11-20

Peptides

UvrD/REP helicase: A
ATP-dependent DNA helicase (UvrD/REP): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

UvrD/REP helicase

ATP-dependent DNA helicase (UvrD/REP)