SMTL ID : 6q0i.1

Inferred intermediate I-7 (I-7-6) of the human antibody lineage 652 in complex with influenza hemagglutinin head domain of A/Beijing/262/95(H1N1)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: N.113, Y.151 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:N.113

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain B: L.46, E.47, W.48, N.61 Chain C: V.100, V.101, F.102 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:L.46, B:W.48, B:W.48, B:N.61, C:F.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McCarthy, K.R. et al., Affinity maturation in a human humoral response to influenza hemagglutinin. Proc.Natl.Acad.Sci.USA (2019)

Release Date

2019-12-18

Peptides

Hemagglutinin: A
Fab heavy chain: B
Fab lambda chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Hemagglutinin

Fab heavy chain

Fab lambda chain

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