SMTL ID : 6q63.2 (2 other biounits)

BT0459

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

monomer

Ligands

1 x CU: COPPER (II) ION(Non-covalent)

CU.1: 4 residues within 4Å: Chain A: C.282, C.301, C.342, C.345 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.282, A:C.301, A:C.342, A:C.345

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: T.641, D.644, L.646, D.769, E.770 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:T.641, A:D.644, A:L.646, A:D.769, A:E.770, H2O.1

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.3: 11 residues within 4Å: Chain A: R.170, H.269, D.332, E.333, W.388, W.405, Y.430, D.432, I.446, W.481, E.483 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:D.332, A:W.388, A:W.405 Hydrogen bonds: A:R.170, A:R.170, A:D.332, A:E.333, A:Y.430, A:D.432 Water bridges: A:D.199, A:H.269

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Briliute, J. et al., Complex N-glycan breakdown by gut Bacteroides involves an extensive enzymatic apparatus encoded by multiple co-regulated genetic loci. Nat Microbiol (2019)

Release Date

2019-05-08

Peptides

Beta-hexosaminidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-hexosaminidase

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