SMTL ID : 6q7j.1

GH3 exo-beta-xylosidase (XlnD) in complex with xylobiose aziridine activity based probe

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.14 Å
Oligo State
homo-dimer
Ligands
24 x NAG: N-ACETYL-D-GLUCOSAMINE(Post Translational Modification)(Non-covalent)(Non-functional Binders)
2 x BMA: BETA-D-MANNOSE(Non-covalent)
13 x MAN: ALPHA-D-MANNOSE(Non-covalent)(Non-functional Binders)
2 x HLB: 5-[3,3-dimethyl-2-[5-(1,3,3-trimethylindol-2-ylidene)penta-1,3-dienyl]indol-1-ium-1-yl]-~{N}-[8-[[(1~{R},2~{S},3~{S},4~{S},5~{R})-2,3,4,5-tetrakis(oxidanyl)cyclohexyl]amino]octyl]pentanamide(Covalent)
4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Schroder, S.P. et al., Dynamic and Functional Profiling of Xylan-Degrading Enzymes inAspergillusSecretomes Using Activity-Based Probes. Acs Cent.Sci. (2019)
Release Date
2019-06-05
Peptides
Exo-1,4-beta-xylosidase xlnD: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
B
B
A

Exo-1,4-beta-xylosidase xlnD

Related Entries With Identical Sequence

6q7i.1