- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.76 Å
- Oligo State
- monomer
- Ligands
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 8 residues within 4Å:- Chain A: E.153, Y.196, Q.228, H.230, W.308, F.313
- Ligands: EDO.10, HQ8.16
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Q.228
EDO.4: 5 residues within 4Å:- Chain A: D.88, D.92, H.140, Y.141, K.144
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.92, A:H.140, A:K.144
- Water bridges: A:D.92
EDO.5: 5 residues within 4Å:- Chain A: N.156, T.160, Y.161, T.163, Y.167
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.156, A:Y.161
EDO.6: 4 residues within 4Å:- Chain A: Q.79, G.119, T.120, W.121
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:T.120
- Water bridges: A:Q.79
EDO.7: 7 residues within 4Å:- Chain A: T.41, E.45, N.68, W.300, D.301, Y.306
- Ligands: XYP.17
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.68, A:D.301, A:D.301
- Water bridges: A:E.45, A:W.308
EDO.8: 3 residues within 4Å:- Chain A: N.43, P.44, T.47
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.43
EDO.9: 2 residues within 4Å:- Chain A: Q.247, S.248
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Q.247
EDO.10: 5 residues within 4Å:- Chain A: Y.196, N.197, H.230, R.264
- Ligands: EDO.3
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:H.230, A:R.264, A:R.264
EDO.11: 4 residues within 4Å:- Chain A: N.156, D.157, R.162
- Ligands: EDO.12
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.157, A:D.157
EDO.12: 4 residues within 4Å:- Chain A: N.156, D.157, D.158
- Ligands: EDO.11
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.157, A:D.158, A:D.158
EDO.13: 3 residues within 4Å:- Chain A: L.266, L.267, P.268
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:L.266
EDO.14: 3 residues within 4Å:- Chain A: P.176, I.177, A.180
2 PLIP interactions:2 interactions with chain A- Water bridges: A:K.131, A:K.131
- 1 x K: POTASSIUM ION(Non-covalent)
- 1 x HQ8: (1~{R},2~{S},4~{S},5~{R})-cyclohexane-1,2,3,4,5-pentol(Covalent)
- 1 x XYP: beta-D-xylopyranose(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schroder, S.P. et al., Dynamic and Functional Profiling of Xylan-Degrading Enzymes inAspergillusSecretomes Using Activity-Based Probes. Acs Cent.Sci. (2019)
- Release Date
- 2019-06-05
- Peptides
- Beta-xylanase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.76 Å
- Oligo State
- monomer
- Ligands
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x K: POTASSIUM ION(Non-covalent)
- 1 x HQ8: (1~{R},2~{S},4~{S},5~{R})-cyclohexane-1,2,3,4,5-pentol(Covalent)
- 1 x XYP: beta-D-xylopyranose(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schroder, S.P. et al., Dynamic and Functional Profiling of Xylan-Degrading Enzymes inAspergillusSecretomes Using Activity-Based Probes. Acs Cent.Sci. (2019)
- Release Date
- 2019-06-05
- Peptides
- Beta-xylanase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B