SMTL ID : 6qgl.1 (1 other biounit)

Crystal structure of VP5 from Haloarchaeal pleomorphic virus 6

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

monomer

Ligands

13 x BR: BROMIDE ION(Non-covalent)

BR.1: 4 residues within 4Å: Chain A: N.61, Y.226, M.227, W.232 Ligand excluded by PLIP BR.2: 4 residues within 4Å: Chain A: T.217, Y.218, F.229, S.230 Ligand excluded by PLIP BR.3: 4 residues within 4Å: Chain A: R.47, V.143, G.144, Y.147 Ligand excluded by PLIP BR.4: 1 residues within 4Å: Chain A: T.42 Ligand excluded by PLIP BR.5: 4 residues within 4Å: Chain A: P.300, S.327, F.466, S.468 Ligand excluded by PLIP BR.6: 3 residues within 4Å: Chain A: K.121, N.124, R.128 Ligand excluded by PLIP BR.7: 3 residues within 4Å: Chain A: E.82, T.273, R.275 Ligand excluded by PLIP BR.8: 2 residues within 4Å: Chain A: F.156, G.157 Ligand excluded by PLIP BR.9: 4 residues within 4Å: Chain A: N.158, W.192, D.193, N.196 Ligand excluded by PLIP BR.10: 1 residues within 4Å: Chain A: R.187 Ligand excluded by PLIP BR.11: 1 residues within 4Å: Chain A: N.298 Ligand excluded by PLIP BR.12: 3 residues within 4Å: Chain A: E.89, N.92, E.267 Ligand excluded by PLIP BR.13: 2 residues within 4Å: Chain A: L.91, G.259 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

El Omari, K. et al., The structure of a prokaryotic viral envelope protein expands the landscape of membrane fusion proteins. Nat Commun (2019)

Release Date

2019-02-27

Peptides

VP5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

VP5

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