SMTL ID : 6qgr.1

The F420-reducing [NiFe] hydrogenase complex from Methanosarcina barkeri at the Nia-S state

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.84 Å
Oligo State
hetero-12-12-12-mer
Ligands
48 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
12 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
24 x 144: TRIS-HYDROXYMETHYL-METHYL-AMMONIUM(Non-covalent)
108 x BU3: (R,R)-2,3-BUTANEDIOL(Non-covalent)
60 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
12 x NFU: formyl[bis(hydrocyanato-1kappaC)]ironnickel(Fe-Ni)(Non-covalent)
12 x FE: FE (III) ION(Non-covalent)
12 x MG: MAGNESIUM ION(Non-covalent)
12 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Ilina, Y. et al., X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases. Angew.Chem.Int.Ed.Engl. (2019)
Release Date
2019-10-23
Peptides
Coenzyme F420 hydrogenase subunit gamma: ADGJMPSVY147
Coenzyme F420 hydrogenase subunit alpha: BEHKNQTWZ258
Coenzyme F420 hydrogenase subunit beta: CFILORUX0369
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
G
D
G
G
G
J
G
M
G
P
G
S
G
V
G
Y
G
1
G
4
G
7
G
B
A
E
A
H
A
K
A
N
A
Q
A
T
A
W
A
Z
A
2
A
5
A
8
A
C
B
F
B
I
B
L
B
O
B
R
B
U
B
X
B
0
B
3
B
6
B
9
B

Coenzyme F420 hydrogenase subunit gamma

Toggle Identical (ADGJMPSVY147)

Coenzyme F420 hydrogenase subunit alpha

Toggle Identical (BEHKNQTWZ258)

Coenzyme F420 hydrogenase subunit beta

Toggle Identical (CFILORUX0369)

Related Entries With Identical Sequence

6qgt.1 | 6qii.1