- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- monomer
- Ligands
- 9 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.10: 15 residues within 4Å:- Chain A: L.37, E.61, T.62, G.63, S.64, G.65, K.66, T.67, T.68, R.103, T.330, R.376, T.377
- Ligands: MG.17, BEF.18
21 PLIP interactions:21 interactions with chain A- Hydrogen bonds: A:E.61, A:G.63, A:G.63, A:S.64, A:G.65, A:K.66, A:T.67, A:T.67, A:T.67, A:T.68, A:T.330, A:R.376
- Water bridges: A:T.67, A:D.159, A:R.376, A:R.376
- Salt bridges: A:K.66, A:R.376, A:R.376
- pi-Cation interactions: A:R.103, A:R.103
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- 5 x SO4: SULFATE ION(Non-functional Binders)
SO4.12: 1 residues within 4Å:- Chain A: P.458
No protein-ligand interaction detected (PLIP)SO4.13: 5 residues within 4Å:- Chain A: R.94, I.120, R.121, T.136, R.142
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.94, A:R.121
- Salt bridges: A:R.142
SO4.14: 2 residues within 4Å:- Chain A: R.93, R.94
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.94
SO4.15: 4 residues within 4Å:- Chain A: Q.177, V.420, E.421, D.422
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Q.177, A:E.421, A:D.422, A:D.422
SO4.16: 3 residues within 4Å:- Chain A: S.24, E.25, R.26
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.25, A:R.26
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 1 x BEF: BERYLLIUM TRIFLUORIDE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hamann, F. et al., Structural basis for RNA translocation by DEAH-box ATPases. Nucleic Acids Res. (2019)
- Release Date
- 2019-03-06
- Peptides
- Prp43: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- monomer
- Ligands
- 9 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- 5 x SO4: SULFATE ION(Non-functional Binders)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 1 x BEF: BERYLLIUM TRIFLUORIDE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hamann, F. et al., Structural basis for RNA translocation by DEAH-box ATPases. Nucleic Acids Res. (2019)
- Release Date
- 2019-03-06
- Peptides
- Prp43: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A