SMTL ID : 6qmt.2 (1 other biounit)

Complement factor D in complex with the inhibitor 2-(2-(3'-(aminomethyl)-[1,1'-biphenyl]-3-carboxamido)phenyl)acetic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x J7B: 2-[2-[[3-[3-(aminomethyl)phenyl]phenyl]carbonylamino]phenyl]ethanoic acid(Non-covalent)

J7B.1: 17 residues within 4Å: Chain A: L.49, C.50, H.65, D.201, S.202, C.203, K.204, G.205, D.206, S.207, V.221, T.222, S.223, R.226, V.227, C.228, G.235 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:K.204, A:K.204, A:V.221, A:R.226 Hydrogen bonds: A:S.202, A:G.205, A:D.206, A:S.207, A:S.207 Water bridges: A:H.65, A:S.202, A:S.223 Salt bridges: A:H.65 pi-Stacking: A:H.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karki, R.G. et al., Design, Synthesis, and Preclinical Characterization of Selective Factor D Inhibitors Targeting the Alternative Complement Pathway. J.Med.Chem. (2019)

Release Date

2019-04-24

Peptides

Complement factor D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Complement factor D

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