SMTL ID : 6qni.1

Liquid Application Method for time-resolved Analyses (LAMA) by serial synchrotron crystallography, Xylose Isomerase 1.0 s timepoint

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: E.181, E.217, D.245, D.287 Ligands: GLC.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.181, A:E.217, A:D.245, A:D.287

1 x GLC: alpha-D-glucopyranose(Non-covalent)

GLC.2: 12 residues within 4Å: Chain A: W.16, H.54, T.90, F.94, V.135, W.137, E.181, E.217, H.220, D.245, D.287 Ligands: MG.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.90, A:T.90, A:H.220 Water bridges: A:W.137, A:N.215 Salt bridges: A:H.54

1 x CO: COBALT (II) ION(Non-covalent)

CO.3: 4 residues within 4Å: Chain A: E.217, H.220, D.255, D.257 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.217, A:H.220, A:D.255, A:D.257, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mehrabi, P. et al., Liquid application method for time-resolved analyses by serial synchrotron crystallography. Nat.Methods (2019)

Release Date

2019-10-02

Peptides

Xylose isomerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Xylose isomerase

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