- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.40 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 4 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
LUT.1: 20 residues within 4Å:- Chain A: M.52, L.53, A.55, A.56, L.59, F.127, D.128, P.129, L.130, F.132, N.149, A.156, F.160, I.171, L.175
- Ligands: CLA.5, CLA.6, CLA.7, CLA.12, CLA.15
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:M.52, A:L.53, A:A.55, A:L.59, A:L.130, A:F.132, A:A.156, A:F.160, A:I.171
- Hydrogen bonds: A:L.130, A:I.171
LUT.25: 20 residues within 4Å:- Chain B: M.53, V.56, L.60, F.142, D.143, P.144, M.145, N.164, L.167, A.168, A.171, F.175, Q.178, P.186, L.190
- Ligands: CLA.28, CLA.29, CLA.30, CLA.35, CHL.38
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:M.53, B:L.60, B:L.60, B:L.167, B:A.168, B:A.171, B:F.175, B:L.190
- Hydrogen bonds: B:D.143, B:M.145, B:Q.178, B:P.186
LUT.47: 15 residues within 4Å:- Chain C: M.49, A.52, F.148, N.149, F.150, A.151, L.173, A.174, A.177, Y.181, Q.184, P.192
- Ligands: CLA.51, CLA.52, CLA.59
11 PLIP interactions:11 interactions with chain C- Hydrophobic interactions: C:M.49, C:A.52, C:F.150, C:L.173, C:A.174, C:A.177, C:Y.181
- Hydrogen bonds: C:N.149, C:F.150, C:A.151, C:Q.184
LUT.65: 16 residues within 4Å:- Chain D: M.52, A.53, V.55, V.56, F.142, D.143, P.144, N.160, L.163, A.164, A.167, F.171, P.182
- Ligands: CLA.69, CLA.70, CLA.71
9 PLIP interactions:9 interactions with chain D- Hydrophobic interactions: D:M.52, D:F.142, D:L.163, D:A.164, D:A.167, D:F.171, D:P.182
- Hydrogen bonds: D:D.143, D:P.182
- 4 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
XAT.2: 15 residues within 4Å:- Chain A: F.25, D.26, P.27, L.28, L.30, A.51, G.54, C.58, W.69, A.72, M.154
- Ligands: CLA.8, CLA.9, CLA.10, CHL.14
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:F.25, A:F.25, A:A.51, A:M.154
- Hydrogen bonds: A:L.28, A:W.69
XAT.26: 20 residues within 4Å:- Chain B: F.26, D.27, P.28, L.29, L.31, H.48, W.51, A.52, G.55, I.59, W.75, A.78, M.169, F.172, V.173
- Ligands: CLA.31, CLA.32, CLA.33, CHL.37, CHL.40
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:P.28, B:A.52, B:W.75, B:M.169, B:V.173
- Hydrogen bonds: B:L.29, B:W.75
XAT.48: 14 residues within 4Å:- Chain C: D.13, L.15, G.51, G.54, C.55, W.75, T.78, V.80, M.175, M.178
- Ligands: CHL.53, CLA.54, CLA.55, CLA.61
7 PLIP interactions:7 interactions with chain C- Hydrophobic interactions: C:L.15, C:V.80, C:M.175
- Hydrogen bonds: C:D.13, C:L.15, C:T.78, C:T.78
XAT.66: 19 residues within 4Å:- Chain D: F.25, D.26, P.27, L.28, W.50, A.51, A.54, I.58, W.75, A.78, M.165, F.168, L.169
- Chain J: W.138
- Ligands: CLA.72, CLA.73, CLA.74, CHL.78, CHL.81
10 PLIP interactions:10 interactions with chain D- Hydrophobic interactions: D:A.51, D:A.54, D:W.75, D:W.75, D:F.168, D:F.168, D:L.169
- Hydrogen bonds: D:D.26, D:L.28, D:W.75
- 23 x BCR: BETA-CAROTENE(Non-covalent)
BCR.3: 7 residues within 4Å:- Chain A: W.50, W.84, A.103, M.104
- Ligands: CLA.10, CLA.15, CLA.17
Ligand excluded by PLIPBCR.4: 7 residues within 4Å:- Chain D: F.98, L.109
- Chain J: R.149
- Ligands: BCR.68, CLA.73, CHL.78, CLA.80
Ligand excluded by PLIPBCR.27: 11 residues within 4Å:- Chain B: W.51, L.100, F.101, W.103, V.104, F.123, L.124
- Ligands: CLA.33, CHL.38, CHL.40, CLA.75
Ligand excluded by PLIPBCR.49: 13 residues within 4Å:- Chain C: L.50, A.104, I.105, F.107, A.108, F.127, L.128
- Ligands: CLA.34, CHL.36, LHG.42, CLA.55, CLA.59, CLA.61
Ligand excluded by PLIPBCR.50: 9 residues within 4Å:- Chain C: F.179, I.187
- Ligands: CLA.54, CLA.58, CLA.60, CLA.62, CLA.102, BCR.133, BCR.134
Ligand excluded by PLIPBCR.67: 10 residues within 4Å:- Chain D: W.50, L.100, F.101, W.103, V.104
- Ligands: CLA.11, LHG.19, CLA.74, CHL.79, CHL.81
Ligand excluded by PLIPBCR.68: 7 residues within 4Å:- Chain J: Q.146, R.149
- Ligands: BCR.4, CLA.18, CLA.73, CLA.80, CAC.86
Ligand excluded by PLIPBCR.133: 12 residues within 4Å:- Chain E: T.150, G.153, G.154, L.157, L.196, L.199, A.200, F.252
- Ligands: BCR.50, CLA.101, CLA.102, BCR.134
Ligand excluded by PLIPBCR.134: 11 residues within 4Å:- Chain E: I.72, W.75, L.76, L.196
- Ligands: BCR.50, CLA.92, CLA.99, CLA.100, CLA.101, CLA.116, BCR.133
Ligand excluded by PLIPBCR.135: 5 residues within 4Å:- Chain E: I.343
- Ligands: CLA.109, CLA.111, CLA.130, BCR.136
Ligand excluded by PLIPBCR.136: 16 residues within 4Å:- Chain E: A.342, A.346, L.347, S.350, A.393, G.394, A.397, L.538, V.542
- Ligands: CLA.111, CLA.113, CLA.114, CLA.122, CLA.123, CLA.126, BCR.135
Ligand excluded by PLIPBCR.137: 15 residues within 4Å:- Chain E: G.662, F.665, L.721, I.724, A.725, W.728
- Chain F: V.438
- Ligands: CLA.88, CLA.95, CLA.115, CLA.129, CLA.172, CLA.173, BCR.189, BCR.200
Ligand excluded by PLIPBCR.138: 9 residues within 4Å:- Chain E: I.434
- Chain F: W.648, T.649, L.678
- Ligands: CLA.143, CLA.149, CLA.179, CLA.181, PQN.183
Ligand excluded by PLIPBCR.184: 8 residues within 4Å:- Chain F: L.188, F.225, L.278, I.285, H.289
- Ligands: CLA.155, CLA.156, CLA.160
Ligand excluded by PLIPBCR.185: 7 residues within 4Å:- Chain F: L.54, I.57, F.149
- Ligands: CLA.146, CLA.152, CLA.153, CLA.168
Ligand excluded by PLIPBCR.186: 9 residues within 4Å:- Chain F: W.123, W.124, I.127, S.138, L.142, W.190
- Ligands: CLA.154, CLA.155, CLA.158
Ligand excluded by PLIPBCR.187: 9 residues within 4Å:- Chain F: F.387, V.411, V.535
- Ligands: SQD.22, CLA.159, CLA.163, CLA.165, CLA.170, BCR.188
Ligand excluded by PLIPBCR.188: 13 residues within 4Å:- Chain F: F.332, G.335, L.336, A.339, M.383, F.387, G.390
- Ligands: CLA.165, CLA.166, CLA.174, CLA.175, CLA.178, BCR.187
Ligand excluded by PLIPBCR.189: 13 residues within 4Å:- Chain F: L.427
- Chain J: P.90, G.93, F.94, V.97, I.101
- Ligands: CLA.127, CLA.129, PQN.131, BCR.137, CLA.172, CLA.173, CLA.196
Ligand excluded by PLIPBCR.198: 11 residues within 4Å:- Chain J: S.73, P.75, T.91, G.102, H.103, W.140, S.144
- Ligands: CLA.171, CLA.172, CLA.177, CLA.197
Ligand excluded by PLIPBCR.200: 13 residues within 4Å:- Chain E: I.71
- Chain K: S.23, L.26, I.27, N.30
- Ligands: CLA.88, CLA.94, CLA.95, CLA.96, BCR.137, CLA.172, CLA.173, BCR.201
Ligand excluded by PLIPBCR.201: 14 residues within 4Å:- Chain E: W.107
- Chain K: Y.7, P.12, L.16, I.20, I.27, E.28, R.31
- Ligands: CLA.90, CLA.95, CLA.96, CLA.199, BCR.200, DGD.203
Ligand excluded by PLIPBCR.202: 5 residues within 4Å:- Chain K: F.21
- Ligands: CLA.39, LMG.43, CLA.199, DGD.203
Ligand excluded by PLIP- 132 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.5: 16 residues within 4Å:- Chain A: R.49, M.52, L.53, Y.122, P.123, F.127, D.128, F.132, S.133, F.139, K.142, K.143, E.146
- Ligands: LUT.1, CLA.6, CLA.15
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:L.53, A:L.53, A:F.127, A:F.132, A:F.132, A:K.142, A:E.146
- Salt bridges: A:R.49, A:K.142
- pi-Cation interactions: A:R.49
CLA.6: 6 residues within 4Å:- Chain A: L.59, K.145, N.149
- Ligands: LUT.1, CLA.5, CLA.11
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:L.59, A:K.145
- Salt bridges: A:K.145, A:K.145
CLA.7: 15 residues within 4Å:- Chain A: V.155, L.158, G.159, G.162, Q.163, A.166, T.167, H.178, N.186, F.187, N.190, S.193
- Ligands: LUT.1, CLA.12, CLA.18
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:L.158, A:L.158, A:A.166, A:F.187
- Hydrogen bonds: A:N.190, A:S.193
CLA.8: 22 residues within 4Å:- Chain A: L.16, P.20, G.21, N.22, F.23, N.24, F.25, D.26, L.30, G.31, L.37, Y.40, R.41, A.43, E.44, R.151, M.154, V.155
- Ligands: XAT.2, CLA.9, CHL.13, LHG.19
16 PLIP interactions:16 interactions with chain A,- Hydrophobic interactions: A:F.23, A:F.25, A:D.26, A:L.37, A:Y.40, A:A.43, A:E.44, A:R.151, A:R.151, A:M.154, A:V.155
- Hydrogen bonds: A:F.23, A:F.25
- Salt bridges: A:R.151
- pi-Cation interactions: A:R.151
- Metal complexes: A:E.44
CLA.9: 8 residues within 4Å:- Chain A: R.39, Y.40, A.43, H.47
- Ligands: XAT.2, CLA.8, CLA.16, CLA.182
4 PLIP interactions:4 interactions with chain A,- Hydrogen bonds: A:R.39
- Salt bridges: A:R.39, A:R.39
- pi-Stacking: A:H.47
CLA.10: 12 residues within 4Å:- Chain A: W.50, L.53, G.57, V.61, L.66, A.72, T.83, W.84, F.85
- Ligands: XAT.2, BCR.3, CLA.17
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:W.50, A:L.53, A:V.61, A:L.66, A:A.72, A:F.85
- Hydrogen bonds: A:F.85
CLA.11: 7 residues within 4Å:- Chain A: K.148, N.149, L.152
- Chain D: L.124
- Ligands: CLA.6, LHG.19, BCR.67
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain D,- Hydrophobic interactions: A:K.148, A:L.152, A:L.152, D:L.124
- Salt bridges: A:K.148
CLA.12: 9 residues within 4Å:- Chain A: H.178, P.182, F.183, N.186, F.187
- Chain D: I.96, L.99
- Ligands: LUT.1, CLA.7
4 PLIP interactions:1 interactions with chain D, 3 interactions with chain A,- Hydrophobic interactions: D:I.96, A:P.182, A:F.183
- Metal complexes: A:H.178
CLA.15: 11 residues within 4Å:- Chain A: I.46, R.49, W.50, L.110, R.111, R.120, P.123, F.127
- Ligands: LUT.1, BCR.3, CLA.5
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:L.110, A:L.110, A:R.111, A:R.111, A:P.123, A:F.127
- Hydrogen bonds: A:R.49
- Salt bridges: A:R.111
- pi-Cation interactions: A:R.111
CLA.16: 12 residues within 4Å:- Chain A: R.39, E.42, I.46, H.47, W.50, M.104, E.108, R.111, N.112
- Ligands: CLA.9, CLA.17, SQD.22
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:I.46, A:M.104
- Salt bridges: A:R.39, A:R.111
- pi-Cation interactions: A:R.111
CLA.17: 13 residues within 4Å:- Chain A: P.73, W.75, P.82, V.89, F.91, I.96, V.99, E.100, A.103
- Ligands: BCR.3, CLA.10, CHL.14, CLA.16
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:P.73, A:W.75, A:P.82, A:V.89, A:I.96, A:I.96, A:E.100, A:A.103
CLA.18: 6 residues within 4Å:- Chain A: F.187, S.193, V.194, P.195
- Ligands: CLA.7, BCR.68
1 PLIP interactions:1 interactions with chain A,- Hydrophobic interactions: A:F.187
CLA.28: 16 residues within 4Å:- Chain B: R.50, M.53, L.54, G.136, Y.137, P.138, F.142, D.143, M.147, F.154, K.158, E.161, N.164
- Ligands: LUT.25, CLA.29, CHL.38
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:R.50, B:M.53, B:L.54, B:L.54, B:F.142, B:F.154, B:K.158, B:E.161, B:N.164
- pi-Cation interactions: B:R.50, B:R.50
CLA.29: 6 residues within 4Å:- Chain B: K.160, N.164, L.167
- Ligands: LUT.25, CLA.28, CLA.34
2 PLIP interactions:2 interactions with chain B,- Hydrophobic interactions: B:K.160, B:L.167
CLA.30: 14 residues within 4Å:- Chain B: L.170, V.173, G.174, A.177, Q.178, T.182, N.189, L.190, H.193, V.200, T.201
- Ligands: LUT.25, CLA.35, CLA.41
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:V.173, B:A.177, B:L.190
- Hydrogen bonds: B:T.201
CLA.31: 20 residues within 4Å:- Chain B: L.20, A.21, G.22, D.23, Y.24, G.25, F.26, D.27, L.31, S.32, M.41, V.42, E.45, H.48, R.166, M.169, L.170
- Ligands: XAT.26, CLA.32, CHL.36
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:Y.24, B:D.27, B:L.31, B:L.31, B:M.41, B:L.170
- Hydrogen bonds: B:D.23, B:Y.24, B:G.25, B:F.26
- Salt bridges: B:R.166
- pi-Cation interactions: B:R.166
CLA.32: 6 residues within 4Å:- Chain B: M.41, H.48
- Ligands: XAT.26, CLA.31, CHL.37, CLA.39
1 PLIP interactions:1 interactions with chain B,- pi-Cation interactions: B:H.48
CLA.33: 9 residues within 4Å:- Chain B: G.58, F.61, F.72, P.73, L.82
- Ligands: XAT.26, BCR.27, CHL.40, LMT.46
0 PLIP interactions:CLA.34: 8 residues within 4Å:- Chain B: Q.159, K.160, K.163, N.164, L.167
- Ligands: CLA.29, LHG.42, BCR.49
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:K.163, B:K.163, B:L.167
- Salt bridges: B:K.163
- pi-Cation interactions: B:K.163, B:K.163
CLA.35: 12 residues within 4Å:- Chain B: L.190, H.193, V.194, P.197, V.200, T.201, F.202
- Chain C: T.96, F.99, I.100
- Ligands: LUT.25, CLA.30
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain C,- Hydrophobic interactions: B:V.194, B:P.197, C:I.100
CLA.39: 13 residues within 4Å:- Chain B: W.40, A.44, V.47, H.48, E.97, L.98, F.101, E.105, R.108
- Ligands: CLA.32, CHL.37, LMG.43, BCR.202
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:W.40, B:V.47, B:L.98, B:F.101, B:F.101
- Salt bridges: B:R.108
- pi-Cation interactions: B:R.108, B:R.108
CLA.41: 9 residues within 4Å:- Chain B: A.177, A.181, F.202, G.206, S.208
- Chain C: F.99
- Ligands: CLA.30, LMG.44, CLA.103
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain C,- Hydrophobic interactions: B:F.202, C:F.99
- Metal complexes: B:G.206
CLA.51: 17 residues within 4Å:- Chain C: R.46, M.49, Y.142, P.143, G.144, F.148, N.149, F.150, A.151, N.152, F.153, G.154, M.160, L.163, E.167
- Ligands: LUT.47, CLA.59
11 PLIP interactions:11 interactions with chain C,- Hydrophobic interactions: C:F.148, C:F.150, C:A.151, C:F.153, C:L.163, C:E.167, C:E.167
- Hydrogen bonds: C:G.144, C:F.153, C:G.154
- pi-Cation interactions: C:R.46
CLA.52: 11 residues within 4Å:- Chain C: Q.184, I.187, T.188, N.195, N.207, L.208, I.209, T.210
- Chain E: G.248, F.253
- Ligands: LUT.47
4 PLIP interactions:4 interactions with chain C,- Hydrophobic interactions: C:I.187, C:I.187, C:N.195, C:L.208
CLA.54: 8 residues within 4Å:- Chain C: F.31, W.36, S.40, H.44
- Ligands: XAT.48, BCR.50, CLA.60, CLA.97
0 PLIP interactions:CLA.55: 11 residues within 4Å:- Chain C: L.50, G.51, G.54, P.58, T.71, V.73, T.78, F.90
- Ligands: XAT.48, BCR.49, CLA.61
3 PLIP interactions:3 interactions with chain C,- Hydrophobic interactions: C:L.50, C:T.78, C:F.90
CLA.56: 2 residues within 4Å:- Chain C: N.166, K.169
0 PLIP interactions:CLA.57: 3 residues within 4Å:- Chain C: H.199, L.200, L.208
3 PLIP interactions:3 interactions with chain C,- Hydrophobic interactions: C:L.200, C:L.208
- pi-Cation interactions: C:H.199
CLA.58: 10 residues within 4Å:- Chain C: V.80, I.81, P.82, P.94, F.95, F.98, E.101
- Ligands: BCR.50, CLA.61, CLA.103
6 PLIP interactions:6 interactions with chain C,- Hydrophobic interactions: C:V.80, C:P.82, C:F.95, C:F.95, C:F.98, C:F.98
CLA.59: 15 residues within 4Å:- Chain C: I.43, R.46, A.108, K.111, R.112, D.115, Q.122, F.127, F.134, P.143, F.147, F.148
- Ligands: LUT.47, BCR.49, CLA.51
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:K.111, C:K.111, C:R.112, C:D.115, C:Q.122, C:F.127, C:F.127, C:F.134, C:P.143
- Hydrogen bonds: C:R.46, C:R.112
- Salt bridges: C:R.112
- pi-Cation interactions: C:R.112
CLA.60: 14 residues within 4Å:- Chain C: Y.39, S.40, I.43, H.44, W.47, I.105, Q.106, E.109, R.112, L.113
- Ligands: BCR.50, CLA.54, CLA.61, CLA.62
6 PLIP interactions:6 interactions with chain C,- Hydrophobic interactions: C:I.105, C:E.109, C:L.113
- Salt bridges: C:R.112
- pi-Cation interactions: C:R.112, C:R.112
CLA.61: 14 residues within 4Å:- Chain C: T.78, G.79, V.80, F.90, W.91, L.97, I.100, E.101, I.105
- Ligands: XAT.48, BCR.49, CLA.55, CLA.58, CLA.60
6 PLIP interactions:6 interactions with chain C,- Hydrophobic interactions: C:T.78, C:V.80, C:F.90, C:L.97, C:E.101, C:I.105
CLA.62: 5 residues within 4Å:- Chain C: V.102, Q.106
- Ligands: CHL.36, BCR.50, CLA.60
2 PLIP interactions:2 interactions with chain C,- Hydrophobic interactions: C:V.102
- Hydrogen bonds: C:Q.106
CLA.69: 16 residues within 4Å:- Chain D: R.49, M.52, A.53, Y.137, P.138, I.141, F.142, L.145, E.153, K.154, D.156, E.157, N.160
- Ligands: LUT.65, CLA.70, CHL.79
13 PLIP interactions:13 interactions with chain D,- Hydrophobic interactions: D:R.49, D:R.49, D:M.52, D:I.141, D:F.142, D:E.153, D:K.154, D:E.157, D:E.157, D:N.160
- Hydrogen bonds: D:R.49
- pi-Cation interactions: D:R.49
- Metal complexes: D:E.157
CLA.70: 7 residues within 4Å:- Chain D: V.56, D.156, N.160, L.163
- Ligands: LUT.65, CLA.69, CLA.75
2 PLIP interactions:2 interactions with chain D,- Hydrophobic interactions: D:V.56, D:L.163
CLA.71: 15 residues within 4Å:- Chain D: L.166, L.169, G.170, S.173, T.174, V.177, N.178, H.189, V.196, T.197, F.198, N.201
- Ligands: LUT.65, CLA.76, CLA.82
7 PLIP interactions:7 interactions with chain D,- Hydrophobic interactions: D:L.166, D:L.169, D:V.177, D:F.198, D:F.198
- Hydrogen bonds: D:S.185, D:F.198
CLA.72: 21 residues within 4Å:- Chain D: L.15, M.19, L.20, G.21, D.22, Y.23, G.24, F.25, L.30, M.37, F.40, R.41, A.43, E.44, N.47, R.162, M.165, L.166
- Chain J: L.142
- Ligands: XAT.66, CLA.77
14 PLIP interactions:13 interactions with chain D, 1 interactions with chain J,- Hydrophobic interactions: D:F.25, D:F.25, D:L.30, D:F.40, D:A.43, D:N.47, D:M.165, D:L.166, J:L.142
- Hydrogen bonds: D:Y.23, D:F.25
- Salt bridges: D:R.162
- pi-Cation interactions: D:R.162
- Metal complexes: D:E.44
CLA.73: 9 residues within 4Å:- Chain D: R.36, W.39
- Chain J: P.141, L.142
- Ligands: BCR.4, XAT.66, BCR.68, CHL.78, CLA.80
3 PLIP interactions:2 interactions with chain J, 1 interactions with chain D,- Hydrophobic interactions: J:P.141
- Hydrogen bonds: J:Q.146
- Salt bridges: D:R.36
CLA.74: 13 residues within 4Å:- Chain D: W.50, A.53, A.54, V.56, G.57, T.61, L.72, P.73, A.78, T.82
- Ligands: XAT.66, BCR.67, CHL.81
4 PLIP interactions:4 interactions with chain D,- Hydrophobic interactions: D:W.50, D:A.54, D:T.61, D:L.72
CLA.75: 9 residues within 4Å:- Chain B: S.122
- Chain D: L.155, D.156, Q.159, N.160, L.163
- Ligands: BCR.27, CLA.70, CLA.77
4 PLIP interactions:4 interactions with chain D,- Hydrophobic interactions: D:Q.159, D:L.163
- Hydrogen bonds: D:D.156, D:N.160
CLA.76: 12 residues within 4Å:- Chain B: F.95, T.96, L.99, L.100
- Chain D: L.186, H.189, L.190, P.193, F.194, T.197, F.198
- Ligands: CLA.71
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain B,- Hydrophobic interactions: D:L.190, D:F.194, B:T.96
- Metal complexes: D:H.189
CLA.77: 14 residues within 4Å:- Chain B: G.102, W.103, T.106, K.107, Q.118
- Chain D: P.3, L.4, W.5, Y.6, P.7, Y.23, F.25
- Ligands: CLA.72, CLA.75
11 PLIP interactions:9 interactions with chain D, 2 interactions with chain B,- Hydrophobic interactions: D:P.3, D:W.5, D:Y.6, D:P.7, D:F.25, D:F.25
- pi-Stacking: D:W.5, D:Y.6
- Metal complexes: D:W.5
- Hydrogen bonds: B:K.107
- Salt bridges: B:K.107
CLA.80: 16 residues within 4Å:- Chain D: W.39, A.43, T.46, N.47, W.50, E.97, F.98, F.101, G.102, E.105, R.108, L.109
- Ligands: BCR.4, BCR.68, CLA.73, CHL.81
11 PLIP interactions:11 interactions with chain D,- Hydrophobic interactions: D:W.39, D:W.50, D:F.101, D:F.101, D:F.101, D:L.109
- Hydrogen bonds: D:T.46, D:N.47
- Salt bridges: D:R.108
- pi-Cation interactions: D:R.108, D:R.108
CLA.82: 9 residues within 4Å:- Chain B: F.95
- Chain D: S.173, F.198, G.202, V.203, I.205
- Ligands: CLA.71, DGD.83, CLA.199
3 PLIP interactions:2 interactions with chain D, 1 interactions with chain B,- Hydrophobic interactions: D:F.198, D:V.203, B:F.95
CLA.88: 22 residues within 4Å:- Chain E: L.658, L.661, G.662, H.664, F.665, W.667, A.668
- Chain F: V.438, D.441, L.525, F.581, W.582, N.585, W.589, L.616, L.620, Y.657
- Ligands: CL0.87, CLA.89, BCR.137, CLA.141, BCR.200
14 PLIP interactions:9 interactions with chain F, 5 interactions with chain E,- Hydrophobic interactions: F:V.438, F:V.438, F:D.441, F:L.525, F:W.582, F:W.582, F:W.589, F:L.616, E:H.664, E:F.665, E:F.665, E:W.667, E:A.668
- pi-Stacking: F:W.589
CLA.89: 22 residues within 4Å:- Chain E: F.665, A.668, F.669, L.671, M.672, F.675, Y.680, W.681, L.684
- Chain F: S.423, S.426, L.427, G.430, F.431, L.434, L.525, L.532, I.533, L.578, W.582
- Ligands: CLA.88, CLA.129
14 PLIP interactions:8 interactions with chain F, 6 interactions with chain E,- Hydrophobic interactions: F:L.427, F:F.431, F:L.434, F:I.533, F:L.578, F:L.578, E:F.665, E:A.668, E:F.669, E:F.675, E:Y.680, E:W.681
- Hydrogen bonds: F:G.430
- pi-Stacking: F:W.582
CLA.90: 12 residues within 4Å:- Chain E: I.37, L.40, H.41
- Chain J: I.123
- Chain K: Y.7, A.11
- Ligands: CLA.91, CLA.98, CLA.128, CLA.129, PQN.131, BCR.201
8 PLIP interactions:5 interactions with chain E, 1 interactions with chain J, 2 interactions with chain K,- Hydrophobic interactions: E:I.37, E:L.40, J:I.123, K:Y.7, K:A.11
- pi-Stacking: E:H.41, E:H.41
- Metal complexes: E:H.41
CLA.91: 15 residues within 4Å:- Chain E: F.23, L.40, H.41, A.44, H.45, F.47, H.50, A.64, G.67, Q.68
- Ligands: CLA.90, CLA.92, CLA.93, CLA.98, CLA.117
7 PLIP interactions:7 interactions with chain E,- Hydrophobic interactions: E:L.40, E:H.41, E:A.44, E:A.64
- Salt bridges: E:H.50
- pi-Cation interactions: E:H.45
- Metal complexes: E:H.45
CLA.92: 21 residues within 4Å:- Chain E: H.45, F.47, I.57, V.61, A.64, H.65, Q.68, L.69, L.73, W.337, H.338, Q.340, L.341, N.344, L.345
- Ligands: CLA.91, CLA.93, CLA.100, CLA.112, CLA.117, BCR.134
15 PLIP interactions:15 interactions with chain E,- Hydrophobic interactions: E:F.47, E:I.57, E:V.61, E:V.61, E:A.64, E:Q.68, E:Q.68, E:L.73, E:W.337, E:W.337, E:Q.340, E:L.341, E:L.341, E:L.341
- pi-Stacking: E:H.65
CLA.93: 13 residues within 4Å:- Chain E: H.45, Q.68, I.71, I.72, W.75, F.348, F.388
- Ligands: CLA.91, CLA.92, CLA.115, CLA.116, CLA.117, LHG.140
5 PLIP interactions:5 interactions with chain E,- Hydrophobic interactions: E:I.72, E:W.75, E:F.348, E:F.388
- Salt bridges: E:H.45
CLA.94: 13 residues within 4Å:- Chain E: I.74, W.75, S.77, G.78, F.81, H.82, F.86, Q.104, W.107
- Ligands: CLA.95, CLA.96, BCR.200, DGD.203
2 PLIP interactions:2 interactions with chain E,- Hydrophobic interactions: E:F.81
- pi-Stacking: E:H.82
CLA.95: 18 residues within 4Å:- Chain E: W.75, M.79, H.82, Q.104, Q.127, I.128, T.129, S.130, A.655, Y.656, L.732
- Ligands: CLA.94, CLA.96, CLA.115, CLA.129, BCR.137, BCR.200, BCR.201
6 PLIP interactions:6 interactions with chain E,- Hydrophobic interactions: E:A.655, E:Y.656, E:L.732
- Hydrogen bonds: E:T.129, E:S.130, E:S.130
CLA.96: 15 residues within 4Å:- Chain E: Q.104, V.105, V.106, W.107, Q.112, I.126, A.655, L.658
- Chain F: V.442
- Chain K: I.27
- Ligands: CLA.94, CLA.95, CLA.173, BCR.200, BCR.201
10 PLIP interactions:8 interactions with chain E, 1 interactions with chain F, 1 interactions with chain K,- Hydrophobic interactions: E:V.106, E:W.107, E:W.107, E:I.126, E:A.655, F:V.442, K:I.27
- Hydrogen bonds: E:Q.104, E:W.107, E:Q.112
CLA.97: 15 residues within 4Å:- Chain C: G.30, F.31, V.32
- Chain E: I.3, F.62, F.66, A.160, C.161, F.167, H.168, A.172, W.178
- Ligands: CLA.54, CLA.99, CLA.100
12 PLIP interactions:2 interactions with chain C, 10 interactions with chain E,- Hydrophobic interactions: C:V.32, E:I.3, E:F.62, E:F.62, E:F.66, E:A.160, E:W.178
- Hydrogen bonds: C:F.31
- Salt bridges: E:H.168
- pi-Stacking: E:H.168, E:H.168, E:H.168
CLA.98: 18 residues within 4Å:- Chain E: T.12, N.13, F.14, K.16, W.17, H.22, E.56, K.60, S.63, A.64, G.67, F.162, G.165, W.166, Y.169, H.170
- Ligands: CLA.90, CLA.91
16 PLIP interactions:16 interactions with chain E,- Hydrophobic interactions: E:T.12, E:F.14, E:K.16, E:K.16, E:W.17, E:K.60, E:W.166, E:W.166, E:Y.169, E:Y.169
- Hydrogen bonds: E:Y.169
- Salt bridges: E:K.16, E:H.22, E:K.60
- pi-Stacking: E:Y.169, E:H.170
CLA.99: 11 residues within 4Å:- Chain C: L.15, L.17
- Chain E: V.1, I.3, W.178, S.184, H.188
- Ligands: CLA.97, CLA.100, CLA.107, BCR.134
7 PLIP interactions:7 interactions with chain E,- Hydrophobic interactions: E:V.1, E:I.3, E:I.3
- Hydrogen bonds: E:S.184
- Salt bridges: E:H.188
- pi-Stacking: E:H.188
- pi-Cation interactions: E:H.188
CLA.100: 15 residues within 4Å:- Chain E: H.65, F.66, L.69, W.178, F.179, S.184, M.185, H.188, H.189, L.193, W.337
- Ligands: CLA.92, CLA.97, CLA.99, BCR.134
9 PLIP interactions:9 interactions with chain E,- Hydrophobic interactions: E:L.69, E:W.178, E:M.185, E:H.188, E:L.193, E:L.193, E:W.337
- Salt bridges: E:H.65
- Metal complexes: E:H.189
CLA.101: 12 residues within 4Å:- Chain E: S.139, S.149, T.150, G.153, G.197, A.200, W.201, H.204
- Ligands: CLA.102, CLA.103, BCR.133, BCR.134
4 PLIP interactions:4 interactions with chain E,- Hydrophobic interactions: E:A.200, E:W.201, E:H.204
- pi-Cation interactions: E:H.204
CLA.102: 14 residues within 4Å:- Chain E: L.199, A.200, G.203, I.206, H.207, F.245, L.249, Y.260, F.263, L.287
- Ligands: BCR.50, CLA.101, CLA.104, BCR.133
8 PLIP interactions:8 interactions with chain E,- Hydrophobic interactions: E:L.199, E:I.206, E:F.245, E:L.249, E:Y.260, E:F.263, E:L.287
- pi-Stacking: E:H.207
CLA.103: 8 residues within 4Å:- Chain B: P.210, H.211
- Chain C: I.81, P.83
- Chain E: S.149
- Ligands: CLA.41, CLA.58, CLA.101
2 PLIP interactions:1 interactions with chain E, 1 interactions with chain C,- pi-Stacking: E:H.229
- Hydrophobic interactions: C:I.81
CLA.104: 12 residues within 4Å:- Chain E: F.252, W.257, Y.260, L.264, F.266, H.284, A.288, V.291, N.489
- Ligands: CLA.102, CLA.105, CLA.123
7 PLIP interactions:7 interactions with chain E,- Hydrophobic interactions: E:F.252, E:W.257, E:W.257, E:W.257, E:W.257, E:L.264, E:V.291
CLA.105: 10 residues within 4Å:- Chain E: H.284, H.285, L.292, H.358, M.362, T.494
- Ligands: CLA.104, CLA.106, CLA.114, CLA.122
7 PLIP interactions:7 interactions with chain E,- Hydrophobic interactions: E:H.285, E:L.292
- Hydrogen bonds: E:H.358
- Salt bridges: E:H.285
- pi-Cation interactions: E:H.285, E:H.285, E:H.285
CLA.106: 15 residues within 4Å:- Chain E: L.194, G.197, S.198, W.201, Q.205, H.285, H.286, I.289, F.293, V.355, M.359, P.364, Y.365
- Ligands: CLA.105, CLA.116
10 PLIP interactions:10 interactions with chain E,- Hydrophobic interactions: E:L.194, E:W.201, E:I.289, E:I.289, E:F.293, E:V.355, E:P.364
- Hydrogen bonds: E:Q.205
- Salt bridges: E:H.286
- pi-Stacking: E:H.286
CLA.107: 10 residues within 4Å:- Chain E: N.187, H.188, A.191, G.192, L.196, H.298, Y.300, T.302, W.304
- Ligands: CLA.99
7 PLIP interactions:7 interactions with chain E,- Hydrophobic interactions: E:N.187, E:A.191, E:L.196, E:L.196, E:L.196, E:W.304
- Hydrogen bonds: E:T.302
CLA.108: 10 residues within 4Å:- Chain E: L.186, L.190, L.292, F.293, Y.300, I.313, L.347
- Ligands: CLA.109, CLA.111, CLA.112
6 PLIP interactions:6 interactions with chain E,- Hydrophobic interactions: E:L.186, E:L.190, E:L.292, E:F.293, E:L.347
- Hydrogen bonds: E:Y.300
CLA.109: 9 residues within 4Å:- Chain E: H.308, I.313, S.316, H.317
- Ligands: CLA.108, CLA.110, CLA.111, CLA.130, BCR.135
3 PLIP interactions:3 interactions with chain E,- Hydrogen bonds: E:S.316
- Salt bridges: E:H.308
- pi-Stacking: E:H.317
CLA.110: 6 residues within 4Å:- Chain E: Q.299, G.305, I.306, G.307, H.308
- Ligands: CLA.109
2 PLIP interactions:2 interactions with chain E,- Hydrophobic interactions: E:I.306
- pi-Stacking: E:H.308
CLA.111: 14 residues within 4Å:- Chain E: L.314, H.317, H.326, L.329, L.414, V.418
- Ligands: CLA.108, CLA.109, CLA.112, CLA.118, CLA.130, BCR.135, BCR.136, LHG.139
8 PLIP interactions:8 interactions with chain E,- Hydrophobic interactions: E:L.329, E:L.414, E:L.414, E:V.418
- Salt bridges: E:H.317, E:H.326
- pi-Stacking: E:H.326, E:H.326
CLA.112: 13 residues within 4Å:- Chain E: V.182, M.185, L.186, H.189, Y.330, L.333, Q.340, I.343, N.344, L.347
- Ligands: CLA.92, CLA.108, CLA.111
10 PLIP interactions:10 interactions with chain E,- Hydrophobic interactions: E:V.182, E:M.185, E:L.186, E:L.186, E:Y.330, E:L.333, E:I.343, E:L.347, E:L.347
- Salt bridges: E:H.189
CLA.113: 16 residues within 4Å:- Chain E: S.350, I.353, I.354, H.357, M.383, V.390, I.531, T.534, V.535, L.538, S.590, L.591
- Ligands: CLA.114, CLA.124, CLA.126, BCR.136
7 PLIP interactions:7 interactions with chain E,- Hydrophobic interactions: E:I.353, E:I.353, E:V.390, E:T.534, E:L.538, E:L.591
- Salt bridges: E:H.357
CLA.114: 14 residues within 4Å:- Chain E: L.347, L.351, I.354, H.358, Y.360, M.362, T.494, S.495, W.498
- Ligands: CLA.105, CLA.113, CLA.122, CLA.124, BCR.136
4 PLIP interactions:4 interactions with chain E,- Hydrophobic interactions: E:L.347, E:L.351, E:W.498
- Metal complexes: E:H.358
CLA.115: 16 residues within 4Å:- Chain E: W.75, M.79, T.129, S.130, F.132, S.377, T.380, H.381, W.384, F.388, I.724, W.728
- Ligands: CLA.93, CLA.95, CLA.116, BCR.137
7 PLIP interactions:7 interactions with chain E,- Hydrophobic interactions: E:T.380, E:W.384, E:F.388, E:W.728, E:W.728
- pi-Stacking: E:H.381
- Metal complexes: E:H.381
CLA.116: 20 residues within 4Å:- Chain E: W.75, L.76, S.130, G.131, F.132, L.135, F.348, L.351, S.352, V.355, M.359, Y.365, L.378, H.381, H.382, I.385
- Ligands: CLA.93, CLA.106, CLA.115, BCR.134
8 PLIP interactions:8 interactions with chain E,- Hydrophobic interactions: E:F.132, E:F.132, E:F.348, E:L.351, E:V.355
- Hydrogen bonds: E:Y.365
- pi-Stacking: E:H.381
- pi-Cation interactions: E:H.382
CLA.117: 18 residues within 4Å:- Chain E: H.41, A.42, H.45, D.46, H.338, L.341, F.388, G.392, H.396, I.399, R.403, R.560, W.577, L.584
- Ligands: CLA.91, CLA.92, CLA.93, LHG.140
11 PLIP interactions:11 interactions with chain E,- Hydrophobic interactions: E:L.341, E:L.341, E:L.584
- Hydrogen bonds: E:H.45, E:D.46, E:R.560
- Salt bridges: E:H.45, E:R.403, E:R.560
- pi-Stacking: E:H.396, E:H.396
CLA.118: 7 residues within 4Å:- Chain E: T.322, R.417, H.421, I.425, H.428
- Ligands: CLA.111, CLA.119
6 PLIP interactions:6 interactions with chain E,- Hydrophobic interactions: E:I.425, E:I.425, E:H.428
- Salt bridges: E:R.417, E:R.420
- pi-Cation interactions: E:H.421
CLA.119: 9 residues within 4Å:- Chain E: H.428, W.431
- Chain F: A.681, K.684, T.685, P.686
- Ligands: CLA.118, CLA.126, CLA.179
7 PLIP interactions:3 interactions with chain F, 4 interactions with chain E,- Hydrophobic interactions: F:K.684, F:T.685, F:P.686, E:W.431
- pi-Stacking: E:W.431
- pi-Cation interactions: E:H.428, E:H.428
CLA.120: 10 residues within 4Å:- Chain E: W.431, I.434, F.435, F.438, H.439
- Ligands: CLA.121, CLA.125, CLA.179, CLA.180, CLA.181
4 PLIP interactions:4 interactions with chain E,- Hydrophobic interactions: E:W.431, E:F.435, E:F.435
- pi-Cation interactions: E:H.439
CLA.121: 13 residues within 4Å:- Chain E: F.438, H.439, G.442, L.443, I.445, H.446, M.450, R.455
- Chain F: H.95
- Ligands: CLA.120, CLA.143, CLA.149, CLA.150
8 PLIP interactions:8 interactions with chain E,- Hydrophobic interactions: E:L.443, E:I.445
- Hydrogen bonds: E:R.455
- Salt bridges: E:H.446, E:R.455
- pi-Cation interactions: E:H.446, E:H.446
- Metal complexes: E:H.446
CLA.122: 13 residues within 4Å:- Chain E: W.474, I.475, T.478, H.479, A.482, T.486, A.487, T.494
- Ligands: CLA.105, CLA.114, CLA.123, CLA.124, BCR.136
10 PLIP interactions:10 interactions with chain E,- Hydrophobic interactions: E:W.474, E:W.474, E:I.475, E:T.478, E:T.494
- Salt bridges: E:H.479
- pi-Stacking: E:H.479, E:H.479, E:H.479, E:H.479
CLA.123: 8 residues within 4Å:- Chain E: T.486, A.487, P.488, N.489, A.490
- Ligands: CLA.104, CLA.122, BCR.136
1 PLIP interactions:1 interactions with chain E,- Hydrophobic interactions: E:P.488
CLA.124: 19 residues within 4Å:- Chain E: H.357, Y.360, F.471, A.472, I.475, Q.476, W.498, H.524, H.527, I.531, V.594, H.597, F.598, K.601
- Ligands: CLA.113, CLA.114, CLA.122, CLA.125, CLA.126
13 PLIP interactions:13 interactions with chain E,- Hydrophobic interactions: E:Y.360, E:F.471, E:A.472, E:I.475, E:H.527, E:I.531, E:V.594, E:V.594, E:F.598, E:F.598, E:K.601
- Hydrogen bonds: E:Q.476
- pi-Stacking: E:H.524
CLA.125: 15 residues within 4Å:- Chain E: V.432, F.435, L.436, P.469, V.470, F.471, A.472, F.521, H.524, H.525, A.528, H.532
- Ligands: CLA.120, CLA.124, CLA.126
12 PLIP interactions:12 interactions with chain E,- Hydrophobic interactions: E:V.432, E:F.435, E:L.436, E:L.436, E:P.469, E:F.471, E:F.471
- Hydrogen bonds: E:V.470, E:F.471, E:A.472
- Salt bridges: E:H.524
- pi-Stacking: E:F.521
CLA.126: 10 residues within 4Å:- Chain E: L.429, V.432, A.528, H.532, V.535
- Ligands: CLA.113, CLA.119, CLA.124, CLA.125, BCR.136
6 PLIP interactions:6 interactions with chain E,- Hydrophobic interactions: E:L.429, E:V.432, E:V.535
- Salt bridges: E:H.532
- pi-Stacking: E:H.532, E:H.532
CLA.127: 19 residues within 4Å:- Chain E: I.688, A.691, H.692, L.695, V.697
- Chain F: S.420, S.423, W.424, L.427
- Chain J: V.104, G.105, Y.108, A.130
- Ligands: CLA.128, PQN.131, CLA.171, CLA.172, BCR.189, CLA.196
12 PLIP interactions:4 interactions with chain J, 7 interactions with chain E, 1 interactions with chain F,- Hydrophobic interactions: J:V.104, J:Y.108, J:Y.108, J:Y.108, E:I.688, E:I.688, E:L.695, E:V.697
- Salt bridges: E:H.692
- pi-Stacking: E:H.692
- Metal complexes: E:H.692
- Hydrogen bonds: F:S.423
CLA.128: 20 residues within 4Å:- Chain E: T.34, I.37, W.38, I.685, V.689, H.692, V.697, P.699, P.703, R.704, L.706
- Chain J: Y.108, I.109, E.122, L.125
- Chain K: V.14
- Ligands: CLA.90, CLA.127, PQN.131, CLA.196
10 PLIP interactions:1 interactions with chain K, 1 interactions with chain J, 8 interactions with chain E,- Hydrophobic interactions: K:V.14, J:L.125, E:T.34, E:I.37, E:I.685, E:V.689, E:P.699, E:P.703, E:P.703, E:L.706
CLA.129: 19 residues within 4Å:- Chain E: W.38, F.665, V.666, F.669, L.706, Q.710, V.714, A.717, H.718, L.721
- Chain K: G.15, L.16
- Ligands: CLA.89, CLA.90, CLA.95, PQN.131, BCR.137, LHG.140, BCR.189
10 PLIP interactions:9 interactions with chain E, 1 interactions with chain K,- Hydrophobic interactions: E:W.38, E:F.665, E:F.669, E:L.706, E:L.721, K:L.16
- Hydrogen bonds: E:Q.710
- pi-Stacking: E:H.718, E:H.718
- Metal complexes: E:H.718
CLA.130: 7 residues within 4Å:- Chain E: K.318, P.320, F.321
- Ligands: CLA.109, CLA.111, BCR.135, LHG.139
3 PLIP interactions:3 interactions with chain E,- Hydrophobic interactions: E:P.320, E:F.321
- pi-Stacking: E:F.321
CLA.141: 23 residues within 4Å:- Chain E: L.634
- Chain F: T.433, Y.437, A.522, L.525, N.585, W.589, F.592, L.616, W.619, L.624, W.625, S.628, F.650, H.654, Y.657, Y.717, T.720, Y.721, F.724
- Ligands: CL0.87, CLA.88, CLA.142
18 PLIP interactions:1 interactions with chain E, 17 interactions with chain F,- Hydrophobic interactions: E:L.634, F:T.433, F:Y.437, F:Y.437, F:L.525, F:W.589, F:W.589, F:F.592, F:F.592, F:L.616, F:W.619, F:L.624, F:L.624, F:F.650, F:Y.657, F:F.724
- Hydrogen bonds: F:Y.657
- pi-Stacking: F:F.650
CLA.142: 18 residues within 4Å:- Chain E: F.441, I.445, F.529, F.585, W.586, N.589, I.630, W.667, Y.719
- Chain F: W.648, L.651, H.654, L.655, A.658, F.661
- Ligands: CL0.87, CLA.141, CLA.143
14 PLIP interactions:10 interactions with chain E, 4 interactions with chain F,- Hydrophobic interactions: E:F.441, E:F.441, E:I.445, E:F.529, E:F.585, E:W.586, E:W.586, E:I.630, E:W.667, E:Y.719, F:W.648, F:L.651, F:H.654, F:F.661
CLA.143: 25 residues within 4Å:- Chain E: N.430, S.433, I.434, G.437, F.438, F.441, I.445, F.529, L.536, I.537, F.585, W.586
- Chain F: L.655, A.658, T.659, F.661, M.662, I.665, Y.670, W.671, L.674
- Ligands: CLA.121, BCR.138, CLA.142, CLA.181
18 PLIP interactions:7 interactions with chain F, 11 interactions with chain E,- Hydrophobic interactions: F:L.655, F:A.658, F:F.661, F:I.665, F:Y.670, F:W.671, E:I.434, E:F.438, E:F.438, E:F.441, E:I.445, E:I.537, E:F.585, E:W.586
- Hydrogen bonds: F:Y.670, E:G.437, E:F.438
- pi-Stacking: E:W.586
CLA.144: 9 residues within 4Å:- Chain F: F.5, F.8, A.28, H.29, F.31, S.49, I.56
- Ligands: CLA.145, CLA.146
3 PLIP interactions:3 interactions with chain F,- Hydrophobic interactions: F:F.5, F:A.28, F:I.56
CLA.145: 15 residues within 4Å:- Chain F: H.29, I.46, S.49, H.50, Q.53, L.54, H.331, L.334, A.337, V.341
- Ligands: CLA.144, CLA.146, CLA.153, CLA.164, CLA.169
4 PLIP interactions:4 interactions with chain F,- Hydrophobic interactions: F:I.46, F:L.54, F:L.334
- pi-Cation interactions: F:H.50
CLA.146: 10 residues within 4Å:- Chain F: Q.53, I.56, I.57, W.60
- Ligands: CLA.144, CLA.145, CLA.167, CLA.168, CLA.169, BCR.185
6 PLIP interactions:6 interactions with chain F,- Hydrophobic interactions: F:I.56, F:I.57, F:I.57, F:W.60, F:W.60
- Salt bridges: F:H.29
CLA.147: 11 residues within 4Å:- Chain F: L.59, W.60, G.63, F.66, H.67, W.70, Q.71, A.90, W.92
- Ligands: CLA.148, CLA.149
4 PLIP interactions:4 interactions with chain F,- Hydrophobic interactions: F:L.59, F:F.66, F:F.66
- pi-Stacking: F:H.67
CLA.148: 14 residues within 4Å:- Chain F: W.60, N.64, A.88, H.89, N.114, I.115, A.116, T.117, S.118, V.645, W.646
- Ligands: CLA.147, CLA.149, CLA.167
7 PLIP interactions:7 interactions with chain F,- Hydrophobic interactions: F:T.117, F:V.645, F:V.645, F:W.646
- Hydrogen bonds: F:T.117, F:S.118
- pi-Cation interactions: F:H.89
CLA.149: 17 residues within 4Å:- Chain E: T.449, A.452, L.453
- Chain F: H.89, A.90, I.91, W.92, D.93, H.95, F.96, N.114, V.645
- Ligands: CLA.121, BCR.138, CLA.147, CLA.148, CLA.150
9 PLIP interactions:7 interactions with chain F, 2 interactions with chain E,- Hydrophobic interactions: F:F.96, F:V.645, F:V.645, E:A.452, E:L.453
- Hydrogen bonds: F:W.92, F:D.93
- pi-Stacking: F:H.95
- Metal complexes: F:D.93
CLA.150: 4 residues within 4Å:- Chain F: P.94, H.95
- Ligands: CLA.121, CLA.149
2 PLIP interactions:2 interactions with chain F,- Hydrophobic interactions: F:P.94
- pi-Stacking: F:H.95
CLA.151: 11 residues within 4Å:- Chain F: F.47, F.51, V.148, F.151, A.152, L.155, H.156, N.160, F.161, W.167
- Ligands: CLA.152
8 PLIP interactions:8 interactions with chain F,- Hydrophobic interactions: F:F.47, F:F.51, F:F.151, F:A.152, F:L.155, F:W.167, F:W.167
- pi-Stacking: F:H.156
CLA.152: 10 residues within 4Å:- Chain F: W.167, D.170, S.173, H.177, N.294, F.295
- Ligands: CLA.151, CLA.153, CLA.160, BCR.185
3 PLIP interactions:3 interactions with chain F,- Hydrophobic interactions: F:F.295
- Hydrogen bonds: F:S.173
- pi-Cation interactions: F:H.177
CLA.153: 14 residues within 4Å:- Chain F: F.47, H.50, F.51, L.54, W.167, F.168, R.174, H.177, H.178, G.181, L.182
- Ligands: CLA.145, CLA.152, BCR.185
8 PLIP interactions:8 interactions with chain F,- Hydrophobic interactions: F:F.47, F:W.167, F:F.168, F:R.174, F:L.182
- Salt bridges: F:H.50
- pi-Cation interactions: F:H.178, F:H.178
CLA.154: 14 residues within 4Å:- Chain F: I.127, G.128, L.129, E.134, S.186, A.189, W.190, H.193, V.197, G.208, W.209, F.212
- Ligands: CLA.155, BCR.186
14 PLIP interactions:14 interactions with chain F,- Hydrophobic interactions: F:I.127, F:W.190, F:H.193, F:V.197, F:W.209, F:W.209, F:W.209, F:F.212
- Salt bridges: F:H.193
- pi-Stacking: F:W.209
- pi-Cation interactions: F:H.193, F:H.193, F:H.193
- Metal complexes: F:H.193
CLA.155: 18 residues within 4Å:- Chain F: L.188, A.189, T.191, G.192, H.196, F.212, V.215, L.216, P.217, G.221, L.222, Y.233, I.254, L.255, L.278
- Ligands: CLA.154, BCR.184, BCR.186
7 PLIP interactions:7 interactions with chain F,- Hydrophobic interactions: F:L.188, F:L.222, F:Y.233, F:I.254, F:L.255, F:L.278
- pi-Stacking: F:H.196
CLA.156: 12 residues within 4Å:- Chain F: W.230, A.231, L.255, F.257, H.275, L.278, A.279, V.282, L.492
- Ligands: LMG.21, CLA.157, BCR.184
8 PLIP interactions:8 interactions with chain F,- Hydrophobic interactions: F:W.230, F:A.231, F:L.255, F:L.278, F:L.278, F:A.279, F:V.282
- pi-Stacking: F:H.275
CLA.157: 16 residues within 4Å:- Chain F: T.256, F.257, L.268, D.272, H.275, H.276, A.279, I.280, H.351, L.355, W.493
- Ligands: CLA.156, CLA.158, CLA.166, CLA.174, CLA.175
10 PLIP interactions:10 interactions with chain F,- Hydrophobic interactions: F:F.257, F:L.268, F:D.272, F:H.275, F:H.276, F:A.279
- Salt bridges: F:H.276
- pi-Stacking: F:H.275, F:H.276, F:H.276
CLA.158: 17 residues within 4Å:- Chain F: W.123, I.127, F.183, S.186, W.190, M.273, H.276, H.277, I.280, V.348, H.351, M.352, P.357, Y.358
- Ligands: CLA.157, CLA.168, BCR.186
13 PLIP interactions:13 interactions with chain F,- Hydrophobic interactions: F:F.183, F:W.190, F:W.190, F:I.280, F:V.348, F:P.357, F:P.357, F:Y.358
- Hydrogen bonds: F:Y.358
- Salt bridges: F:H.277
- pi-Stacking: F:W.190, F:H.277, F:H.277
CLA.159: 15 residues within 4Å:- Chain F: L.175, L.179, F.183, L.283, F.284, A.287, M.290, Y.291, L.301, I.304
- Ligands: CLA.162, CLA.163, CLA.164, CLA.166, BCR.187
7 PLIP interactions:7 interactions with chain F,- Hydrophobic interactions: F:L.175, F:L.179, F:F.183, F:L.283, F:F.284, F:A.287
- Hydrogen bonds: F:Y.291
CLA.160: 11 residues within 4Å:- Chain F: N.176, H.177, A.180, V.185, H.289, Y.291, T.293, F.295, G.296
- Ligands: CLA.152, BCR.184
4 PLIP interactions:4 interactions with chain F,- Hydrophobic interactions: F:A.180, F:V.185, F:F.295
- pi-Cation interactions: F:H.289
CLA.161: 7 residues within 4Å:- Chain F: H.289, M.290, I.297, G.298, H.299
- Ligands: SQD.22, CLA.162
4 PLIP interactions:4 interactions with chain F,- Hydrophobic interactions: F:I.297
- Salt bridges: F:H.299
- pi-Stacking: F:H.299, F:H.299
CLA.162: 11 residues within 4Å:- Chain F: M.290, H.299, A.303, I.304, A.307, H.308
- Ligands: SQD.22, CLA.159, CLA.161, CLA.163, CLA.182
1 PLIP interactions:1 interactions with chain F,- pi-Stacking: F:H.308
CLA.163: 12 residues within 4Å:- Chain F: L.305, H.308, H.319, F.332, V.407, V.411
- Ligands: CLA.159, CLA.162, CLA.164, CLA.170, CLA.182, BCR.187
6 PLIP interactions:6 interactions with chain F,- Hydrophobic interactions: F:F.332, F:V.407, F:V.411
- Salt bridges: F:H.308
- pi-Stacking: F:H.319
- Metal complexes: F:H.319
CLA.164: 15 residues within 4Å:- Chain F: R.174, L.175, H.178, F.183, L.301, V.326, Q.333, L.336, A.337, S.340, V.341, I.344
- Ligands: CLA.145, CLA.159, CLA.163
6 PLIP interactions:6 interactions with chain F,- Hydrophobic interactions: F:L.301, F:V.326, F:L.336, F:A.337, F:I.344
- Salt bridges: F:H.178
CLA.165: 18 residues within 4Å:- Chain F: T.343, S.346, L.347, Q.350, Q.376, M.383, F.387, L.527, T.530, T.531, L.534, I.587
- Ligands: CLA.166, CLA.176, CLA.177, CLA.178, BCR.187, BCR.188
7 PLIP interactions:7 interactions with chain F,- Hydrophobic interactions: F:M.383, F:F.387, F:F.387, F:L.527, F:T.531, F:L.534, F:I.587
CLA.166: 13 residues within 4Å:- Chain F: T.343, L.347, Q.350, H.351, S.354, L.355, F.509
- Ligands: CLA.157, CLA.159, CLA.165, CLA.174, CLA.178, BCR.188
6 PLIP interactions:6 interactions with chain F,- Hydrophobic interactions: F:T.343, F:L.347, F:L.355, F:F.509
- Hydrogen bonds: F:T.343
- Metal complexes: F:H.351
CLA.167: 17 residues within 4Å:- Chain F: W.60, T.117, S.118, S.370, T.373, H.374, Y.377, I.378, F.381, I.718, F.719, Y.721, A.722, I.726
- Ligands: CLA.146, CLA.148, CLA.168
13 PLIP interactions:13 interactions with chain F,- Hydrophobic interactions: F:T.373, F:Y.377, F:Y.377, F:Y.377, F:I.378, F:F.381, F:I.718, F:F.719, F:Y.721, F:A.722
- Salt bridges: F:H.374
- pi-Stacking: F:H.374
- Metal complexes: F:H.374
CLA.168: 17 residues within 4Å:- Chain F: W.60, W.123, V.341, I.344, T.345, V.348, M.352, Y.358, L.371, H.374, H.375, I.378, I.382
- Ligands: CLA.146, CLA.158, CLA.167, BCR.185
8 PLIP interactions:8 interactions with chain F,- Hydrophobic interactions: F:W.123, F:V.341, F:I.344, F:V.348, F:I.378, F:I.382
- pi-Stacking: F:H.374
- pi-Cation interactions: F:H.375
CLA.169: 17 residues within 4Å:- Chain F: A.26, H.29, D.30, L.334, L.338, F.381, I.382, C.384, G.385, H.389, I.392, R.396, Y.573, F.576
- Ligands: CLA.145, CLA.146, DGD.191
9 PLIP interactions:9 interactions with chain F,- Hydrophobic interactions: F:D.30, F:L.334, F:L.334, F:L.338, F:F.381, F:Y.573, F:F.576, F:F.576
- pi-Stacking: F:H.389
CLA.170: 13 residues within 4Å:- Chain F: G.314, L.315, V.407, R.410, V.411, H.414, I.418, H.421
- Ligands: CLA.163, CLA.171, CLA.178, CLA.182, BCR.187
9 PLIP interactions:9 interactions with chain F,- Hydrophobic interactions: F:L.315, F:V.407, F:V.411, F:I.418, F:H.421
- Hydrogen bonds: F:R.410
- Salt bridges: F:R.410, F:H.414
- pi-Cation interactions: F:H.414
CLA.171: 12 residues within 4Å:- Chain E: K.694, L.695
- Chain F: H.421, W.424
- Chain J: L.95
- Ligands: CLA.127, CLA.170, CLA.172, CLA.177, CLA.178, CLA.182, BCR.198
4 PLIP interactions:1 interactions with chain E, 2 interactions with chain F, 1 interactions with chain J,- Hydrophobic interactions: E:L.695, F:W.424, J:L.95
- pi-Stacking: F:H.421
CLA.172: 17 residues within 4Å:- Chain F: W.424, L.427, F.428, F.431, H.432
- Chain J: T.91, F.94, A.98, W.140
- Ligands: CLA.127, BCR.137, CLA.171, CLA.173, CLA.177, BCR.189, BCR.198, BCR.200
10 PLIP interactions:6 interactions with chain J, 4 interactions with chain F,- Hydrophobic interactions: J:T.91, J:F.94, J:A.98, J:W.140, J:W.140, F:F.431
- pi-Stacking: J:F.94, F:F.428, F:H.432
- Metal complexes: F:H.432
CLA.173: 19 residues within 4Å:- Chain E: V.110
- Chain F: H.432, G.435, V.438, H.439, V.442, K.451, I.453
- Chain K: N.30, P.34, D.35, P.36, L.37
- Ligands: DGD.83, CLA.96, BCR.137, CLA.172, BCR.189, BCR.200
13 PLIP interactions:10 interactions with chain F, 1 interactions with chain E, 2 interactions with chain K,- Hydrophobic interactions: F:V.438, F:V.438, F:H.439, F:V.442, F:I.453, E:V.110, K:L.37
- Hydrogen bonds: F:K.451, K:N.30
- Salt bridges: F:H.439, F:K.451
- pi-Cation interactions: F:H.439
- Metal complexes: F:H.439
CLA.174: 13 residues within 4Å:- Chain F: W.462, I.463, A.466, Q.467, L.477, L.478, W.493, W.497
- Ligands: CLA.157, CLA.166, CLA.175, CLA.176, BCR.188
7 PLIP interactions:7 interactions with chain F,- Hydrophobic interactions: F:W.462, F:W.462, F:I.463, F:I.463, F:A.466, F:L.477, F:L.478
CLA.175: 10 residues within 4Å:- Chain F: L.477, P.484, A.485, A.488, G.489, L.492, W.493
- Ligands: CLA.157, CLA.174, BCR.188
6 PLIP interactions:6 interactions with chain F,- Hydrophobic interactions: F:L.477, F:L.477, F:A.485, F:A.488, F:W.493, F:W.493
CLA.176: 18 residues within 4Å:- Chain F: Y.353, Y.372, F.459, A.460, I.463, Q.464, L.510, I.512, H.520, I.523, L.527, V.590, Y.593, W.594
- Ligands: CLA.165, CLA.174, CLA.177, CLA.197
8 PLIP interactions:8 interactions with chain F,- Hydrophobic interactions: F:F.459, F:A.460, F:I.523, F:L.527, F:Y.593, F:Y.593, F:W.594
- Hydrogen bonds: F:Q.464
CLA.177: 18 residues within 4Å:- Chain F: F.428, L.429, E.456, P.457, V.458, F.459, A.460, F.517, H.520, H.521
- Chain J: S.73
- Ligands: CLA.165, CLA.171, CLA.172, CLA.176, CLA.178, CLA.197, BCR.198
13 PLIP interactions:13 interactions with chain F,- Hydrophobic interactions: F:F.428, F:F.428, F:L.429, F:F.459, F:F.459, F:F.517, F:F.517
- Hydrogen bonds: F:F.459, F:A.460
- Salt bridges: F:H.520
- pi-Stacking: F:F.517
- pi-Cation interactions: F:H.521
- Metal complexes: F:H.521
CLA.178: 16 residues within 4Å:- Chain F: I.418, H.421, L.422, W.424, V.425, A.524, L.527, H.528, T.531
- Ligands: CLA.165, CLA.166, CLA.170, CLA.171, CLA.177, CLA.182, BCR.188
9 PLIP interactions:9 interactions with chain F,- Hydrophobic interactions: F:H.421, F:L.422, F:W.424, F:V.425, F:T.531
- Salt bridges: F:H.528
- pi-Stacking: F:H.528, F:H.528
- Metal complexes: F:H.528
CLA.179: 11 residues within 4Å:- Chain E: S.427, W.431, I.434
- Chain F: L.678, A.681, T.685
- Ligands: CLA.119, CLA.120, BCR.138, CLA.180, PQN.183
4 PLIP interactions:3 interactions with chain F, 1 interactions with chain E,- Hydrophobic interactions: F:L.678, F:T.685, E:I.434
- pi-Stacking: F:H.682
CLA.180: 13 residues within 4Å:- Chain F: T.18, I.21, W.22, H.682, Y.692, W.693, K.694, P.697, V.698
- Ligands: CLA.120, CLA.179, CLA.181, PQN.183
5 PLIP interactions:5 interactions with chain F,- Hydrophobic interactions: F:I.21, F:W.22, F:H.682, F:W.693
- Hydrogen bonds: F:K.694
CLA.181: 14 residues within 4Å:- Chain F: W.22, F.652, L.655, V.656, T.659, M.662, F.663, V.708, H.712
- Ligands: CLA.120, BCR.138, CLA.143, CLA.180, PQN.183
9 PLIP interactions:9 interactions with chain F,- Hydrophobic interactions: F:W.22, F:F.652, F:L.655, F:V.656, F:F.663
- Salt bridges: F:H.712
- pi-Stacking: F:H.712, F:H.712
- Metal complexes: F:H.712
CLA.182: 15 residues within 4Å:- Chain A: R.39, Y.40
- Chain F: A.307, H.308, T.309, P.311, G.314, H.319
- Ligands: CLA.9, CLA.162, CLA.163, CLA.170, CLA.171, CLA.178, LHG.190
1 PLIP interactions:1 interactions with chain A,- Hydrophobic interactions: A:Y.40
CLA.196: 11 residues within 4Å:- Chain J: Y.96, Y.100, I.101, V.104, A.134, W.138
- Chain K: W.18, L.26
- Ligands: CLA.127, CLA.128, BCR.189
4 PLIP interactions:2 interactions with chain J, 2 interactions with chain K,- Hydrophobic interactions: J:I.101, J:W.138, K:W.18, K:L.26
CLA.197: 10 residues within 4Å:- Chain F: F.459, W.462
- Chain J: D.74, P.75, G.76, L.77, R.80
- Ligands: CLA.176, CLA.177, BCR.198
7 PLIP interactions:6 interactions with chain F, 1 interactions with chain J,- Hydrophobic interactions: F:F.459, F:F.459, F:W.462, F:W.462, J:P.75
- pi-Stacking: F:W.462, F:W.462
CLA.199: 10 residues within 4Å:- Chain D: I.205
- Chain K: F.21, G.24, L.25, E.28, R.31
- Ligands: CLA.82, BCR.201, BCR.202, DGD.203
6 PLIP interactions:1 interactions with chain D, 5 interactions with chain K,- Hydrophobic interactions: D:I.205, K:F.21, K:L.25
- Salt bridges: K:R.31
- pi-Cation interactions: K:R.31, K:R.31
- 10 x CHL: CHLOROPHYLL B(Non-covalent)
CHL.13: 11 residues within 4Å:- Chain A: N.5, F.6, A.7, P.8, F.25
- Chain D: W.103, T.106, K.107, Y.110
- Ligands: CLA.8, LHG.19
5 PLIP interactions:2 interactions with chain A, 3 interactions with chain D,- Hydrophobic interactions: A:F.25, D:W.103, D:T.106
- Metal complexes: A:F.6
- Hydrogen bonds: D:K.107
CHL.14: 7 residues within 4Å:- Chain A: Y.70, L.74, A.76, V.77, E.100
- Ligands: XAT.2, CLA.17
2 PLIP interactions:2 interactions with chain A,- Hydrophobic interactions: A:Y.70, A:A.76
CHL.36: 14 residues within 4Å:- Chain B: L.5, W.6, P.8, Y.24
- Chain C: Q.106, F.107, L.110, K.111, Q.114, F.127
- Ligands: CLA.31, LHG.42, BCR.49, CLA.62
7 PLIP interactions:3 interactions with chain C, 4 interactions with chain B,- Hydrophobic interactions: C:F.107, B:W.6, B:P.8, B:Y.24
- Hydrogen bonds: C:K.111
- Salt bridges: C:K.111
- Metal complexes: B:W.6
CHL.37: 12 residues within 4Å:- Chain B: Y.76, D.77, A.78, G.79, K.80, L.90, I.94, E.97
- Ligands: XAT.26, CLA.32, CLA.39, CHL.40
3 PLIP interactions:3 interactions with chain B,- Hydrophobic interactions: B:L.90, B:I.94
- Hydrogen bonds: B:K.80
CHL.38: 17 residues within 4Å:- Chain B: Q.43, R.50, W.51, W.103, V.104, K.107, R.108, D.111, Q.118, F.123, L.130, G.136, P.138, F.142
- Ligands: LUT.25, BCR.27, CLA.28
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:W.103, B:V.104, B:K.107, B:R.108, B:D.111, B:F.123, B:L.130, B:P.138, B:P.138, B:F.142
- Hydrogen bonds: B:R.50
CHL.40: 12 residues within 4Å:- Chain B: G.79, Q.83, I.88, L.93, T.96, E.97, L.100, F.101
- Ligands: XAT.26, BCR.27, CLA.33, CHL.37
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:I.88, B:L.93, B:L.93, B:E.97, B:L.100, B:F.101, B:F.101, B:F.101
CHL.53: 16 residues within 4Å:- Chain C: L.6, G.8, D.9, Y.10, G.11, F.12, D.13, L.17, L.18, L.37, E.41, H.44, R.172, M.175, L.176
- Ligands: XAT.48
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:F.12, C:L.18, C:L.37, C:H.44, C:R.172, C:L.176, C:L.176
- Hydrogen bonds: C:Y.10, C:F.12, C:L.17, C:R.172
- pi-Cation interactions: C:R.172, C:R.172
CHL.78: 8 residues within 4Å:- Chain D: W.76, E.77, G.79, A.80
- Ligands: BCR.4, XAT.66, CLA.73, CHL.81
0 PLIP interactions:CHL.79: 12 residues within 4Å:- Chain D: R.49, W.103, V.104, E.105, K.107, R.108, D.111, L.130, G.136, I.141
- Ligands: BCR.67, CLA.69
8 PLIP interactions:8 interactions with chain D,- Hydrophobic interactions: D:W.103, D:V.104, D:V.104, D:K.107, D:D.111, D:L.130
- Hydrogen bonds: D:R.49
- pi-Cation interactions: D:R.108
CHL.81: 14 residues within 4Å:- Chain D: W.50, G.79, T.82, T.89, L.93, I.96, E.97, L.100, F.101
- Ligands: XAT.66, BCR.67, CLA.74, CHL.78, CLA.80
6 PLIP interactions:6 interactions with chain D,- Hydrophobic interactions: D:T.89, D:L.93, D:L.93, D:I.96, D:E.97, D:L.100
- 5 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.19: 9 residues within 4Å:- Chain A: K.148, R.151, L.152
- Chain D: S.122, L.124
- Ligands: CLA.8, CLA.11, CHL.13, BCR.67
3 PLIP interactions:1 interactions with chain D, 2 interactions with chain A- Hydrogen bonds: D:S.122
- Hydrophobic interactions: A:R.151
- Salt bridges: A:K.148
LHG.42: 8 residues within 4Å:- Chain B: P.4, Y.24, K.163, R.166, L.167
- Ligands: CLA.34, CHL.36, BCR.49
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:R.166
- Salt bridges: B:K.163
LHG.139: 10 residues within 4Å:- Chain E: H.317, K.318, G.319, P.320, F.321, T.322, H.326, L.414
- Ligands: CLA.111, CLA.130
4 PLIP interactions:4 interactions with chain E- Hydrogen bonds: E:F.321, E:T.322, E:T.322, E:H.326
LHG.140: 12 residues within 4Å:- Chain E: W.38, N.39, A.42, D.43, N.49, R.560, S.707, T.709, Q.710
- Ligands: CLA.93, CLA.117, CLA.129
9 PLIP interactions:9 interactions with chain E- Hydrophobic interactions: E:W.38, E:A.42
- Hydrogen bonds: E:N.39, E:D.43, E:N.49, E:R.560, E:S.707
- Salt bridges: E:R.560, E:R.560
LHG.190: 8 residues within 4Å:- Chain A: L.30, G.31, Y.40
- Chain F: P.310, P.311, A.312
- Ligands: LMG.20, CLA.182
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain F- Hydrophobic interactions: A:L.30
- Hydrogen bonds: A:G.31, F:A.312
- 4 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)(Non-functional Binders)
LMG.20: 3 residues within 4Å:- Chain A: E.29, K.32
- Ligands: LHG.190
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:K.32
LMG.21: 3 residues within 4Å:- Chain F: A.231, S.491
- Ligands: CLA.156
2 PLIP interactions:2 interactions with chain F- Hydrogen bonds: F:S.491, F:S.491
LMG.43: 2 residues within 4Å:- Ligands: CLA.39, BCR.202
No protein-ligand interaction detected (PLIP)LMG.44: 1 residues within 4Å:- Ligands: CLA.41
No protein-ligand interaction detected (PLIP)- 1 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.22: 6 residues within 4Å:- Chain A: R.39, N.112
- Ligands: CLA.16, CLA.161, CLA.162, BCR.187
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.112, A:N.112, A:R.120
- Salt bridges: A:R.39
- 6 x CAC: CACODYLATE ION(Non-covalent)
CAC.23: 3 residues within 4Å:- Chain F: P.484, S.487
- Ligands: CAC.24
No protein-ligand interaction detected (PLIP)CAC.24: 2 residues within 4Å:- Chain A: A.165
- Ligands: CAC.23
No protein-ligand interaction detected (PLIP)CAC.63: 3 residues within 4Å:- Chain C: I.187, T.188
- Chain E: Q.235
No protein-ligand interaction detected (PLIP)CAC.64: 1 residues within 4Å:- Chain C: F.153
No protein-ligand interaction detected (PLIP)CAC.85: 2 residues within 4Å:- Chain D: A.176
- Ligands: GSH.84
No protein-ligand interaction detected (PLIP)CAC.86: 6 residues within 4Å:- Chain D: D.35, R.36, W.39
- Chain J: Q.146, R.149
- Ligands: BCR.68
No protein-ligand interaction detected (PLIP)- 4 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)(Non-functional Binders)
DGD.45: 4 residues within 4Å:- Chain B: H.30, E.33
- Chain E: E.11, K.171
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain E- Hydrogen bonds: B:E.33, E:E.11
- Salt bridges: B:H.30, B:H.30
DGD.83: 8 residues within 4Å:- Chain D: S.204
- Chain K: F.33, P.36, V.38, F.39, S.40
- Ligands: CLA.82, CLA.173
4 PLIP interactions:2 interactions with chain D, 2 interactions with chain K- Hydrogen bonds: D:S.204, D:S.204
- Hydrophobic interactions: K:P.36, K:F.39
DGD.191: 15 residues within 4Å:- Chain F: L.12, W.22, Y.23, A.26, T.27, D.30, S.33, S.556, Y.573, V.703, Q.704, L.707
- Chain G: G.69, N.70
- Ligands: CLA.169
11 PLIP interactions:1 interactions with chain G, 10 interactions with chain F- Hydrogen bonds: G:N.70, F:T.27, F:D.30, F:D.30, F:S.556, F:S.556
- Hydrophobic interactions: F:W.22, F:A.26, F:Y.573, F:Q.704, F:L.707
DGD.203: 4 residues within 4Å:- Ligands: CLA.94, CLA.199, BCR.201, BCR.202
No protein-ligand interaction detected (PLIP)- 1 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.46: 2 residues within 4Å:- Chain B: N.85
- Ligands: CLA.33
No protein-ligand interaction detected (PLIP)- 2 x GSH: GLUTATHIONE(Non-functional Binders)(Non-covalent)
GSH.84: 1 residues within 4Å:- Ligands: CAC.85
No protein-ligand interaction detected (PLIP)GSH.192: 2 residues within 4Å:- Chain F: T.223, W.226
1 PLIP interactions:1 interactions with chain F- Hydrophobic interactions: F:W.226
- 1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
CL0.87: 19 residues within 4Å:- Chain E: Y.588, N.589, S.592, I.593, F.596, L.638, S.642, H.664, W.667, Y.719, T.726, T.727, F.730
- Chain F: L.620, L.624, W.625
- Ligands: CLA.88, CLA.141, CLA.142
13 PLIP interactions:10 interactions with chain E, 3 interactions with chain F,- Hydrophobic interactions: E:I.593, E:F.596, E:L.638, E:W.667, E:T.726, E:F.730, F:L.620, F:L.624, F:W.625
- pi-Stacking: E:W.667, E:W.667
- pi-Cation interactions: E:H.664
- Metal complexes: E:H.664
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
PQN.131: 15 residues within 4Å:- Chain E: M.672, F.673, S.676, G.677, R.678, W.681, A.705, L.706, G.711
- Chain K: W.18
- Ligands: CLA.90, CLA.127, CLA.128, CLA.129, BCR.189
7 PLIP interactions:6 interactions with chain E, 1 interactions with chain K- Hydrophobic interactions: E:F.673, E:F.673, E:R.678, E:W.681, K:W.18
- Hydrogen bonds: E:L.706
- pi-Stacking: E:W.681
PQN.183: 14 residues within 4Å:- Chain F: W.22, M.662, F.663, S.666, W.667, R.668, W.671, A.699, L.700, A.705
- Ligands: BCR.138, CLA.179, CLA.180, CLA.181
11 PLIP interactions:11 interactions with chain F- Hydrophobic interactions: F:W.22, F:W.22, F:F.663, F:R.668, F:W.671, F:W.671, F:L.700, F:A.705
- Hydrogen bonds: F:S.666, F:L.700
- pi-Stacking: F:W.671
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.132: 10 residues within 4Å:- Chain E: C.563, P.566, T.571, C.572, R.712
- Chain F: C.559, G.561, P.562, T.567, C.568
4 PLIP interactions:2 interactions with chain E, 2 interactions with chain F,- Metal complexes: E:C.563, E:C.572, F:C.559, F:C.568
SF4.194: 12 residues within 4Å:- Chain G: C.20, P.21, L.22, V.24, C.47, V.48, G.49, C.50, K.51, R.52, C.53, V.66
4 PLIP interactions:4 interactions with chain G,- Metal complexes: G:C.20, G:C.47, G:C.50, G:C.53
SF4.195: 9 residues within 4Å:- Chain G: C.10, G.12, C.13, T.14, C.16, A.39, C.57, T.59, S.63
4 PLIP interactions:4 interactions with chain G,- Metal complexes: G:C.10, G:C.13, G:C.16, G:C.57
- 1 x CA: CALCIUM ION(Non-covalent)
CA.193: 6 residues within 4Å:- Chain F: A.500, I.501, N.503, N.506, L.508, F.509
3 PLIP interactions:3 interactions with chain F- Metal complexes: F:I.501, F:N.503, F:L.508
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Perez-Boerema, A. et al., Structure of a minimal photosystem I from the green alga Dunaliella salina. Nat.Plants (2020)
- Release Date
- 2020-02-12
- Peptides
- Chlorophyll a-b binding protein, chloroplastic: A
Lhc2: B
Chlorophyll a-b binding protein, chloroplastic: C
Lhc4: D
Photosystem I P700 chlorophyll a apoprotein A1: E
Photosystem I P700 chlorophyll a apoprotein A2: F
Photosystem I iron-sulfur center: G
PsaD: H
PsaE: I
PsaF: J
Photosystem I reaction center subunit IX: K - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
1B
2C
3D
4E
AF
BG
CH
DI
EJ
FK
J - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.40 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 4 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- 4 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- 23 x BCR: BETA-CAROTENE(Non-covalent)
- 132 x CLA: CHLOROPHYLL A(Non-covalent)
- 10 x CHL: CHLOROPHYLL B(Non-covalent)
- 5 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
- 4 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)(Non-functional Binders)
- 1 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
- 6 x CAC: CACODYLATE ION(Non-covalent)
- 4 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)(Non-functional Binders)
- 1 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
- 2 x GSH: GLUTATHIONE(Non-functional Binders)(Non-covalent)
- 1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 1 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Perez-Boerema, A. et al., Structure of a minimal photosystem I from the green alga Dunaliella salina. Nat.Plants (2020)
- Release Date
- 2020-02-12
- Peptides
- Chlorophyll a-b binding protein, chloroplastic: A
Lhc2: B
Chlorophyll a-b binding protein, chloroplastic: C
Lhc4: D
Photosystem I P700 chlorophyll a apoprotein A1: E
Photosystem I P700 chlorophyll a apoprotein A2: F
Photosystem I iron-sulfur center: G
PsaD: H
PsaE: I
PsaF: J
Photosystem I reaction center subunit IX: K - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
1B
2C
3D
4E
AF
BG
CH
DI
EJ
FK
J - Membrane
-
We predict this structure to be a membrane protein.