SMTL ID : 6qsp.1

Ketosynthase (ApeO) in Complex with its Chain Length Factor (ApeC) from Xenorhabdus doucetiae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

hetero-1-1-mer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: Y.133, Q.134 No protein-ligand interaction detected (PLIP) GOL.3: 5 residues within 4Å: Chain B: L.69, H.72, Q.73, V.74, A.125 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.69, B:V.74 GOL.4: 7 residues within 4Å: Chain B: R.82, H.83, I.136, T.178, P.179, P.210, Q.211 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:R.82, B:P.179, B:Q.211 Water bridges: B:I.136, B:S.138, B:S.212 GOL.5: 6 residues within 4Å: Chain B: D.6, I.7, G.194, L.195, W.219, R.239 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:D.6, B:D.6, B:I.7, B:W.219, B:R.239, B:R.239

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 4 residues within 4Å: Chain B: K.24, W.219, L.220, R.239 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:W.219 Salt bridges: B:K.24, B:R.239

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grammbitter, G.L.C. et al., An Uncommon Type II PKS Catalyzes Biosynthesis of Aryl Polyene Pigments. J.Am.Chem.Soc. (2019)

Release Date

2019-04-03

Peptides

Beta-ketoacyl synthase: A
Uncharacterized protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Beta-ketoacyl synthase

Uncharacterized protein