SMTL ID : 6r5i.1

The crystal structure of the Glycoside Hydrolase BglX from P. aeruginosa

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: D.79, F.123, M.220, D.255, M.287 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.79, A:D.255 Salt bridges: A:K.176 SO4.3: 3 residues within 4Å: Chain B: R.598, A.603, N.604 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.604, B:N.604 Water bridges: B:R.598 Salt bridges: B:R.598 SO4.4: 6 residues within 4Å: Chain B: D.79, F.123, K.176, M.220, D.255, W.398 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.79 Salt bridges: B:K.176

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: D.661, V.663, E.713 6 PLIP interactions: 2 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.661, A:V.663, H2O.2, H2O.4, H2O.5, H2O.6 MG.5: 3 residues within 4Å: Chain B: D.661, V.663, E.713 6 PLIP interactions: 2 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:D.661, B:V.663, H2O.25, H2O.26, H2O.28, H2O.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mahasenan, K.V. et al., Catalytic Cycle of Glycoside Hydrolase BglX fromPseudomonas aeruginosaand Its Implications for Biofilm Formation. Acs Chem.Biol. (2020)

Release Date

2020-04-15

Peptides

Periplasmic beta-glucosidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Periplasmic beta-glucosidase

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