SMTL ID : 6rcl.1

Crystal structure of REXO2-D199A-AA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

homo-dimer

Ligands

1 x A- A: RNA (5'-R(P*AP*A)-3')(Non-covalent)

A-A.1: 19 residues within 4Å: Chain A: D.11, L.12, E.13, M.14, T.15, G.16, L.17, W.60, C.61, H.65, N.106, S.107, E.110, S.134, H.158 Chain B: Y.128, R.129 Ligands: ZN.2, MG.3 Protein-ligand interaction information (PLIP) not available

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: D.11, E.13, H.158 Ligands: A-A.1 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.13, A:H.158

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain A: D.11, L.12 Ligands: A-A.1, A-A.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.11, H2O.1, H2O.2, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nicholls, T.J. et al., Dinucleotide Degradation by REXO2 Maintains Promoter Specificity in Mammalian Mitochondria. Mol.Cell (2019)

Release Date

2019-10-09

Peptides

Oligoribonuclease, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Oligoribonuclease, mitochondrial

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