SMTL ID : 6rp3.1

Truncated Norcoclaurine synthase with reaction intermediate mimic

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

monomer

Ligands

1 x KCZ: 4-[2-[[(2~{R})-2-phenylpropyl]amino]ethyl]benzene-1,2-diol(Non-covalent)

KCZ.1: 13 residues within 4Å: Chain A: Y.32, L.37, L.45, L.64, M.66, F.68, Y.77, E.79, F.81, K.91, V.93, P.148, M.152 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.45, A:L.64, A:F.68, A:F.68, A:F.81, A:F.81, A:V.93, A:P.148 Hydrogen bonds: A:E.79, A:K.91 Water bridges: A:W.34, A:A.38

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: Y.107, H.131 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.131 EDO.3: 2 residues within 4Å: Chain A: K.138, I.139 2 PLIP interactions: 2 interactions with chain A Water bridges: A:E.135, A:K.138 EDO.4: 4 residues within 4Å: Chain A: I.15, E.141, I.144, T.145 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roddan, R. et al., Acceptance and Kinetic Resolution of alpha-Methyl-Substituted Aldehydes by Norcoclaurine Synthases. Acs Catalysis (2019)

Release Date

2019-10-09

Peptides

S-norcoclaurine synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

S-norcoclaurine synthase

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