- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.31 Å
- Oligo State
- monomer
- Ligands
- 1 x HEC: HEME C(Covalent)
- 3 x EVB: sulfonato-calix[8]arene(Non-covalent)
EVB.2: 10 residues within 4Å:- Chain A: K.16, T.17, L.20, Q.21, T.24, E.26, G.29, P.30, H.31, K.32
15 PLIP interactions:15 interactions with chain A- Hydrophobic interactions: A:L.20, A:L.20, A:L.20, A:Q.21, A:T.24, A:P.30, A:P.30, A:P.30
- Hydrogen bonds: A:L.20, A:Q.21, A:E.26, A:E.26, A:K.32, A:K.32
- Water bridges: A:K.32
EVB.3: 12 residues within 4Å:- Chain A: A.5, G.6, A.8, K.9, A.12, T.101, Y.102, K.104, K.105, A.106
- Ligands: SPM.11, SPM.12
22 PLIP interactions:22 interactions with chain A- Hydrophobic interactions: A:A.5, A:K.9, A:A.12, A:T.101, A:Y.102, A:Y.102, A:K.105
- Hydrogen bonds: A:G.6, A:A.8
- Water bridges: A:G.6, A:G.6, A:A.8, A:K.9, A:Y.102, A:K.104, A:K.104, A:K.104, A:K.105
- Salt bridges: A:K.9, A:K.104, A:K.105, A:K.105
EVB.4: 10 residues within 4Å:- Chain A: N.75, K.77, K.78, G.82, K.84, M.85, A.86, F.87, G.88
- Ligands: SO4.6
18 PLIP interactions:18 interactions with chain A- Hydrophobic interactions: A:K.77, A:K.77, A:K.78, A:K.84, A:A.86, A:A.86
- Hydrogen bonds: A:N.75, A:N.75, A:K.77, A:K.77, A:K.77, A:G.82, A:M.85, A:M.85
- Water bridges: A:G.88, A:K.91
- Salt bridges: A:K.78, A:K.84
- 6 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 4 residues within 4Å:- Chain A: R.18, G.89, L.90, K.91
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:K.91
- Water bridges: A:K.92, A:K.92
- Salt bridges: A:R.18
SO4.6: 6 residues within 4Å:- Chain A: R.18, A.86, F.87, G.88, G.89
- Ligands: EVB.4
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:A.86, A:G.88, A:G.89
- Water bridges: A:R.18
- Salt bridges: A:R.18
SO4.7: 3 residues within 4Å:- Chain A: T.74, N.75, K.91
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:T.74, A:N.75
- Salt bridges: A:K.91
SO4.8: 3 residues within 4Å:- Chain A: E.2, E.93, R.96
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.2
- Salt bridges: A:R.96
SO4.9: 1 residues within 4Å:- Chain A: K.60
2 PLIP interactions:2 interactions with chain A- Water bridges: A:K.60
- Salt bridges: A:K.60
SO4.10: 2 residues within 4Å:- Chain A: E.26, K.27
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:K.27, A:A.106
- Water bridges: A:E.108, A:E.108
- 2 x SPM: SPERMINE(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Engilberge, S. et al., Tuning Protein Frameworks via Auxiliary Supramolecular Interactions. Acs Nano (2019)
- Release Date
- 2019-09-18
- Peptides
- Cytochrome c iso-1: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.31 Å
- Oligo State
- monomer
- Ligands
- 1 x HEC: HEME C(Covalent)
- 3 x EVB: sulfonato-calix[8]arene(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 2 x SPM: SPERMINE(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Engilberge, S. et al., Tuning Protein Frameworks via Auxiliary Supramolecular Interactions. Acs Nano (2019)
- Release Date
- 2019-09-18
- Peptides
- Cytochrome c iso-1: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A