SMTL ID : 6rwl.1

SIVrcm intasome

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-8-2-2-mer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.13, H.17, C.41, C.44 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.13, A:H.17, A:C.41, A:C.44 ZN.2: 4 residues within 4Å: Chain B: H.13, H.17, C.41, C.44 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.13, B:H.17, B:C.41, B:C.44 ZN.3: 4 residues within 4Å: Chain C: H.13, H.17, C.41, C.44 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.13, C:H.17, C:C.41, C:C.44 ZN.4: 4 residues within 4Å: Chain F: H.13, H.17, C.41, C.44 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:H.13, F:H.17, F:C.41, F:C.44 ZN.5: 4 residues within 4Å: Chain I: H.13, H.17, C.41, C.44 4 PLIP interactions: 4 interactions with chain I Metal complexes: I:H.13, I:H.17, I:C.41, I:C.44 ZN.6: 4 residues within 4Å: Chain J: H.13, H.17, C.41, C.44 4 PLIP interactions: 4 interactions with chain J Metal complexes: J:H.13, J:H.17, J:C.41, J:C.44 ZN.7: 4 residues within 4Å: Chain K: H.13, H.17, C.41, C.44 4 PLIP interactions: 4 interactions with chain K Metal complexes: K:H.13, K:H.17, K:C.41, K:C.44 ZN.8: 4 residues within 4Å: Chain N: H.13, H.17, C.41, C.44 4 PLIP interactions: 4 interactions with chain N Metal complexes: N:H.13, N:H.17, N:C.41, N:C.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cook, N.J. et al., Structural basis of second-generation HIV integrase inhibitor action and viral resistance. Science (2020)

Release Date

2020-02-05

Peptides

Pol protein: ABCFIJKN
Pol protein: DL
Pol protein: EM

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

F
M

I
I

J
J

K
K

N
E

D
D

L
L

E
F

M
N

Pol protein

Pol protein

Pol protein

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