SMTL ID : 6s16.1

T. thermophilus RuvC in complex with Holliday junction substrate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.41 Å

Oligo State

homo-dimer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 5 residues within 4Å: Chain A: P.104, V.105, L.169 Chain B: P.46, K.48 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.105, A:L.169

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain B: H.15, P.144, S.145, H.146 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gorecka, K.M. et al., RuvC uses dynamic probing of the Holliday junction to achieve sequence specificity and efficient resolution. Nat Commun (2019)

Release Date

2019-09-25

Peptides

Crossover junction endodeoxyribonuclease RuvC: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Crossover junction endodeoxyribonuclease RuvC